RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 LTAP01374 205 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 ELANEP08246 267 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 UBE2G1P62253 170 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 BAGE2Q86Y30 109 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 IMMP2LQ96T52 175 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 MLST8Q9BVC4 326 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 TEP1Q99973 2627 aaKnown RBP6.31□□□□□ -1.4
NECAP1-202ENST00000450991 DIRC3C9JPN6 131 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 TCTEX1D4Q5JR98 221 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 CMTM2Q8TAZ6 248 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 SGK494Q96LW2 274 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 OSTCQ9NRP0 149 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 SELENOKQ9Y6D0 94 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 V9GYV3 84 aa6.31□□□□□ -1.4
NECAP1-202ENST00000450991 C5orf52A6NGY3 159 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 M0R3E3 92 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 MGST1P10620 155 aaKnown RBP6.3□□□□□ -1.4
NECAP1-202ENST00000450991 ERVFC1-1P60608 527 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 HERV-K104P63124 156 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 FOXL1Q12952 345 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 VAMP3Q15836 100 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 DEFB136Q30KP8 78 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 GOLT1AQ6ZVE7 132 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 Q86TA4 180 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 C1QL4Q86Z23 238 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 TMEM75Q8N9X5 138 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 RNASE7Q9H1E1 156 aaKnown RBP6.3□□□□□ -1.4
NECAP1-202ENST00000450991 AAMDCQ9H7C9 122 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 ZNF331Q9NQX6 463 aaPredicted RBP6.3□□□□□ -1.4
NECAP1-202ENST00000450991 TRAV8-1A0A0A6YYK1 113 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 FAM231DQ6ZW35 169 aa6.3□□□□□ -1.4
NECAP1-202ENST00000450991 C2CD3Q4AC94 2353 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 TMEM213A2RRL7 107 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 ZNF785A8K8V0 405 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 LGALS1P09382 135 aaKnown RBP6.29□□□□□ -1.4
NECAP1-202ENST00000450991 EDN2P20800 178 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 RPS10P46783 165 aaKnown RBP6.29□□□□□ -1.4
NECAP1-202ENST00000450991 IBA57Q5T440 356 aaKnown RBP6.29□□□□□ -1.4
NECAP1-202ENST00000450991 KCNIP4Q6PIL6 250 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 GPHB5Q86YW7 130 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 LINC01006Q8NI28 216 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 UBE2E2Q96LR5 201 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 DUX3Q96PT4 197 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 IL36BQ9NZH7 164 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 A0A1W2PRX2 142 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 C1orf196B1AJZ1 125 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 K7EMT4 169 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 CRLF1O75462 422 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 HLA-DMBP28068 263 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 FAM3BP58499 235 aaPredicted RBP6.29□□□□□ -1.4
NECAP1-202ENST00000450991 DMRTA1Q5VZB9 504 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 TMEM183AQ8IXX5 376 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 BOD1L2Q8IYS8 172 aa6.29□□□□□ -1.4
NECAP1-202ENST00000450991 IGHV4OR15-8A0A075B7B6 117 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 A0A087WW49 117 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 TRAV8-2A0A0B4J237 113 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 IGHV7-4-1A0A0J9YVY3 117 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 TYMSP04818 313 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 RAB5BP61020 215 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 IGFL4Q6B9Z1 124 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 PRNTQ86SH4 94 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 SLC50A1Q9BRV3 221 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 ZNF492Q9P255 531 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 PSG8Q9UQ74 426 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 NIPBLQ6KC79 2804 aaeCLIP6.28□□□□□ -1.4
NECAP1-202ENST00000450991 TRAV9-1A0A075B6T8 112 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 TRBV7-9A0A0J9YWB2 115 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 CHEK1O14757 476 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 TCF21O43680 179 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 CD28P10747 220 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 CSN1S1P47710 185 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 RPL19P84098 196 aaKnown RBP6.28□□□□□ -1.4
NECAP1-202ENST00000450991 RPEL1Q2QD12 228 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 LINC00322Q6ZN03 302 aaPredicted RBP6.28□□□□□ -1.4
NECAP1-202ENST00000450991 C8orf86Q6ZUL3 223 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 WIPF2Q8TF74 440 aaPredicted RBP6.28□□□□□ -1.4
NECAP1-202ENST00000450991 JMJD8Q96S16 334 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 VPS25Q9BRG1 176 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
NECAP1-202ENST00000450991 DAZ1Q9NQZ3 744 aaKnown RBP6.28□□□□□ -1.4
NECAP1-202ENST00000450991 A0A1W2PS18 150 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 C19orf71A6NCJ1 209 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 ZNF705FA8MVS1 300 aaPredicted RBP6.27□□□□□ -1.41
NECAP1-202ENST00000450991 PHOX2AO14813 284 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 FAM106AQ4KMX7 169 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 GRAMD2BQ96HH9 432 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 ZFP30Q9Y2G7 519 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 MAST4O15021 2626 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 IGKV2-40A0A087WW87 121 aaPredicted RBP6.27□□□□□ -1.41
NECAP1-202ENST00000450991 SMIM27A0A1W2PRY6 76 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 IGKV2D-40P01614 121 aaPredicted RBP6.27□□□□□ -1.41
NECAP1-202ENST00000450991 TRGC2P03986 189 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 NPSP0C0P6 89 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 HOXD3P31249 432 aaPredicted RBP6.27□□□□□ -1.41
NECAP1-202ENST00000450991 SYNJ2BPP57105 145 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 LCN12Q6JVE5 192 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 PRR27Q6MZM9 219 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 RNF182Q8N6D2 247 aa6.27□□□□□ -1.41
NECAP1-202ENST00000450991 KLHL30-AS1Q8NEE0 82 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms