RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 CCL18P55774 89 aa12.17□□□□□ -0.46
CLTCL1-203ENST00000449918 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
CLTCL1-203ENST00000449918 LINC00612Q8N6U2 182 aa12.17□□□□□ -0.46
CLTCL1-203ENST00000449918 SCGB1C1Q8TD33 95 aa12.17□□□□□ -0.46
CLTCL1-203ENST00000449918 FUT9Q9Y231 359 aa12.17□□□□□ -0.46
CLTCL1-203ENST00000449918 GAGE12BA1L429 117 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 KLLNB2CW77 178 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 GAGE7O76087 117 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 IFNA5P01569 189 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 NMBP08949 121 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 GAGE12FP0CL80 117 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 GAGE12GP0CL81 117 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 GAGE12IP0CL82 117 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 OR5I1Q13606 314 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 TMEM78Q5T7P6 136 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 FAM122CQ6P4D5 195 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 ZNF680Q8NEM1 530 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 FAM19A4Q96LR4 140 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 BATF3Q9NR55 127 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 HSPB11Q9Y547 144 aa12.16□□□□□ -0.46
CLTCL1-203ENST00000449918 GPX1P07203 203 aa12.15□□□□□ -0.46
CLTCL1-203ENST00000449918 OR10J4P0C629 311 aa12.15□□□□□ -0.46
CLTCL1-203ENST00000449918 CRISP2P16562 243 aa12.15□□□□□ -0.46
CLTCL1-203ENST00000449918 M6PRP20645 277 aa12.15□□□□□ -0.46
CLTCL1-203ENST00000449918 RPL12P30050 165 aaKnown RBP12.15□□□□□ -0.46
CLTCL1-203ENST00000449918 RNASE4P34096 147 aaKnown RBP12.15□□□□□ -0.46
CLTCL1-203ENST00000449918 C1orf134Q5TEV5 83 aa12.15□□□□□ -0.46
CLTCL1-203ENST00000449918 FXYD5Q96DB9 178 aa12.15□□□□□ -0.46
CLTCL1-203ENST00000449918 LINC00467Q9BRT7 94 aa12.15□□□□□ -0.46
CLTCL1-203ENST00000449918 A0A1B0GVY2 172 aa12.14□□□□□ -0.47
CLTCL1-203ENST00000449918 OR7C2O60412 319 aa12.14□□□□□ -0.47
CLTCL1-203ENST00000449918 ZNF324O75467 553 aaPredicted RBP12.14□□□□□ -0.47
CLTCL1-203ENST00000449918 CSN1S1P47710 185 aa12.14□□□□□ -0.47
CLTCL1-203ENST00000449918 CD300CQ08708 224 aa12.14□□□□□ -0.47
CLTCL1-203ENST00000449918 FFAR4Q5NUL3 377 aa12.14□□□□□ -0.47
CLTCL1-203ENST00000449918 GNPNAT1Q96EK6 184 aaPredicted RBP12.14□□□□□ -0.47
CLTCL1-203ENST00000449918 TRAV26-1A0A087WT03 109 aa12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 IGKV2-40A0A087WW87 121 aaPredicted RBP12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 IGKV2D-40P01614 121 aaPredicted RBP12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 TAS2R45P59539 299 aa12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 BTN1A1Q13410 526 aa12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 ANXA2RQ3ZCQ2 193 aa12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 LYPD1Q8N2G4 141 aa12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 EIF4E3Q8N5X7 224 aaKnown RBP12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 ZNF503Q96F45 646 aa12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 VGLL1Q99990 258 aa12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 GSN-AS1Q9NRJ2 163 aa12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 ZNF492Q9P255 531 aa12.13□□□□□ -0.47
CLTCL1-203ENST00000449918 RANP62826 216 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-203ENST00000449918 ZNRF2Q8NHG8 242 aa12.12□□□□□ -0.47
CLTCL1-203ENST00000449918 RXFP4Q8TDU9 374 aa12.12□□□□□ -0.47
CLTCL1-203ENST00000449918 SMIM3Q9BZL3 60 aa12.12□□□□□ -0.47
CLTCL1-203ENST00000449918 MBD2Q9UBB5 411 aa12.12□□□□□ -0.47
CLTCL1-203ENST00000449918 TRGV2A0A075B6R0 118 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 TRBV7-9A0A0J9YWB2 115 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 H3BNG1 76 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 RGS13O14921 159 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 ZNF138P52744 262 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 UBE2L3P68036 154 aaKnown RBP12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 KHDC3LQ587J8 217 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 Q6ZTI0 123 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 SSX7Q7RTT5 188 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 ZFAND2AQ8N6M9 145 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 C11orf72Q8NBR9 251 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 PHYHIPLQ96FC7 376 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 LINC00588Q9Y4M8 146 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
CLTCL1-203ENST00000449918 A0A0J9YY99 117 aa12.1□□□□□ -0.47
CLTCL1-203ENST00000449918 NBDYA0A0U1RRE5 68 aa12.1□□□□□ -0.47
CLTCL1-203ENST00000449918 RBAKDNA6NC62 111 aa12.1□□□□□ -0.47
CLTCL1-203ENST00000449918 HOXA5P20719 270 aa12.1□□□□□ -0.47
CLTCL1-203ENST00000449918 C18orf15Q96N68 181 aa12.1□□□□□ -0.47
CLTCL1-203ENST00000449918 Q9H3A6 140 aa12.1□□□□□ -0.47
CLTCL1-203ENST00000449918 TMPRSS5Q9H3S3 457 aa12.1□□□□□ -0.47
CLTCL1-203ENST00000449918 TRGV1A0A0A0MS02 117 aa12.09□□□□□ -0.47
CLTCL1-203ENST00000449918 IBA57Q5T440 356 aaKnown RBP12.09□□□□□ -0.47
CLTCL1-203ENST00000449918 NACAE9PAV3 2078 aa12.08□□□□□ -0.48
CLTCL1-203ENST00000449918 IGHV1OR15-1A0A075B7D0 117 aa12.08□□□□□ -0.48
CLTCL1-203ENST00000449918 A0A1W2PPV4 95 aa12.08□□□□□ -0.48
CLTCL1-203ENST00000449918 TCL1AP56279 114 aa12.08□□□□□ -0.48
CLTCL1-203ENST00000449918 ACOT6Q3I5F7 207 aaPredicted RBP12.08□□□□□ -0.48
CLTCL1-203ENST00000449918 ARPC5LQ9BPX5 153 aa12.08□□□□□ -0.48
CLTCL1-203ENST00000449918 SPINK4O60575 86 aa12.07□□□□□ -0.48
CLTCL1-203ENST00000449918 FAM74A1Q5RGS3 127 aa12.07□□□□□ -0.48
CLTCL1-203ENST00000449918 PRR9Q5T870 116 aa12.07□□□□□ -0.48
CLTCL1-203ENST00000449918 Q8TAT8 98 aa12.07□□□□□ -0.48
CLTCL1-203ENST00000449918 Q9H8V8 135 aa12.07□□□□□ -0.48
CLTCL1-203ENST00000449918 WFDC1Q9HC57 220 aa12.07□□□□□ -0.48
CLTCL1-203ENST00000449918 KLF12Q9Y4X4 402 aa12.07□□□□□ -0.48
CLTCL1-203ENST00000449918 ALG5Q9Y673 324 aa12.07□□□□□ -0.48
CLTCL1-203ENST00000449918 DIRC3C9JPN6 131 aa12.06□□□□□ -0.48
CLTCL1-203ENST00000449918 ZNF266Q14584 549 aa12.06□□□□□ -0.48
CLTCL1-203ENST00000449918 PQLC2Q6ZP29 291 aa12.06□□□□□ -0.48
CLTCL1-203ENST00000449918 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
CLTCL1-203ENST00000449918 CMTM2Q8TAZ6 248 aa12.06□□□□□ -0.48
CLTCL1-203ENST00000449918 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
CLTCL1-203ENST00000449918 OTORQ9NRC9 128 aa12.06□□□□□ -0.48
CLTCL1-203ENST00000449918 TP53TG3Q9ULZ0 132 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms