RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SNHG12Q9BXW3 62 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 OBSL1O75147 1896 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 LTBP2Q14767 1821 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 A0A087WWL8 130 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 TRBV7-9A0A0J9YWB2 115 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 IGLC7A0M8Q6 106 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 C22orf46C9J442 243 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 NDUFS8O00217 210 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 SLC25A16P16260 332 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 SYNJ2BPP57105 145 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 SPRY4Q9C004 299 aa8.29□□□□□ -1.08
CTC1-202ENST00000449476 COL4A4P53420 1690 aaPredicted RBP8.28□□□□□ -1.08
CTC1-202ENST00000449476 A0A1W2PNU3 283 aaPredicted RBP8.28□□□□□ -1.08
CTC1-202ENST00000449476 K7EN84 100 aa8.28□□□□□ -1.08
CTC1-202ENST00000449476 SHISA9B4DS77 424 aa8.27□□□□□ -1.08
CTC1-202ENST00000449476 ZNF491Q8N8L2 437 aa8.27□□□□□ -1.08
CTC1-202ENST00000449476 TNCP24821 2201 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 IGLC2P0DOY2 106 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 IGLC3P0DOY3 106 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 LINC01356Q8N9X3 169 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 OTOGLQ3ZCN5 2332 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 ZNF415Q09FC8 603 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 LCNL1Q6ZST4 164 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 ZC2HC1AQ96GY0 325 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 CHCHD5Q9BSY4 110 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 UBE2V1Q13404 147 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 C8orf86Q6ZUL3 223 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 C8orf31Q8N9H6 132 aa8.27□□□□□ -1.09
CTC1-202ENST00000449476 TRAV8-2A0A0B4J237 113 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 SAP30O75446 220 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 IGHV4-39P01824 125 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 MRPL51Q4U2R6 128 aaKnown RBP8.26□□□□□ -1.09
CTC1-202ENST00000449476 GAGE13Q4V321 117 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 PRSS57Q6UWY2 283 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 ARHGAP21Q5T5U3 1957 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 CD5LO43866 347 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 GRNP28799 593 aaKnown RBP8.26□□□□□ -1.09
CTC1-202ENST00000449476 KIR3DS1Q14943 382 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 NSUN5P1Q3KNT7 163 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 KLHL30-AS1Q8NEE0 82 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 TRGV1A0A0A0MS02 117 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 NDUFS7O75251 213 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 PYGO2Q9BRQ0 406 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 ADARB2-AS1A8MUL3 147 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 TMEM238C9JI98 176 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 NBL1P41271 181 aa8.26□□□□□ -1.09
CTC1-202ENST00000449476 RPL36AP83881 106 aaKnown RBP8.26□□□□□ -1.09
CTC1-202ENST00000449476 RPL36ALQ969Q0 106 aaKnown RBP8.26□□□□□ -1.09
CTC1-202ENST00000449476 IGHV1-24A0A0C4DH33 117 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 DEFB131AP59861 70 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 PAX2Q02962 417 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 CFAP161Q6P656 301 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 MTURNQ8N3F0 131 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 MAPK1IP1LQ8NDC0 245 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 C17orf77Q96MU5 243 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 WNK1Q9H4A3 2382 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 TEX43Q6ZNM6 134 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 DENND4AQ7Z401 1863 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 TSPAN13O95857 204 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 IGLL1P15814 213 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 GATA3P23771 443 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 PLEKHB2Q96CS7 222 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 A0A1B0GV72 72 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 A8MWV9 139 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 RNF223E7ERA6 249 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 PRSS33Q8NF86 280 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 UBE2E2Q96LR5 201 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 CHAC1Q9BUX1 264 aa8.25□□□□□ -1.09
CTC1-202ENST00000449476 PTPN13Q12923 2485 aa8.24□□□□□ -1.09
CTC1-202ENST00000449476 VGLL1Q99990 258 aa8.24□□□□□ -1.09
CTC1-202ENST00000449476 MED12LQ86YW9 2145 aa8.24□□□□□ -1.09
CTC1-202ENST00000449476 WISP2O76076 250 aa8.24□□□□□ -1.09
CTC1-202ENST00000449476 IGHV3-53P01767 116 aa8.24□□□□□ -1.09
CTC1-202ENST00000449476 CMC4P56277 68 aaPredicted RBP8.24□□□□□ -1.09
CTC1-202ENST00000449476 COX11Q9Y6N1 276 aa8.24□□□□□ -1.09
CTC1-202ENST00000449476 KIAA1549LQ6ZVL6 1849 aa8.24□□□□□ -1.09
CTC1-202ENST00000449476 RIPPLY3P57055 190 aa8.24□□□□□ -1.09
CTC1-202ENST00000449476 C2orf66Q6UXQ4 117 aa8.24□□□□□ -1.09
CTC1-202ENST00000449476 SPINK13Q1W4C9 94 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 COA6Q5JTJ3 125 aaKnown RBP8.23□□□□□ -1.09
CTC1-202ENST00000449476 SEM1Q6ZVN7 128 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 SIGLEC8Q9NYZ4 499 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 RBMY1BA6NDE4 496 aaKnown RBP8.23□□□□□ -1.09
CTC1-202ENST00000449476 RBMY1EA6NEQ0 496 aaKnown RBP8.23□□□□□ -1.09
CTC1-202ENST00000449476 NDUFA4O00483 81 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 LTAP01374 205 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 IGLV2-14P01704 120 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 RBMY1DP0C7P1 496 aaKnown RBP8.23□□□□□ -1.09
CTC1-202ENST00000449476 RBMY1A1P0DJD3 496 aaKnown RBP8.23□□□□□ -1.09
CTC1-202ENST00000449476 RBMY1CP0DJD4 496 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 MORN3Q6PF18 240 aaPredicted RBP8.23□□□□□ -1.09
CTC1-202ENST00000449476 Q8N8P6 123 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 CDPF1Q6NVV7 123 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 INSP01308 110 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 C1orf122Q6ZSJ8 110 aa8.23□□□□□ -1.09
CTC1-202ENST00000449476 NPYP01303 97 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 MALP21145 153 aa8.22□□□□□ -1.09
CTC1-202ENST00000449476 FAM120AOSQ5T036 256 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms