RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 HMGB3O15347 200 aaKnown RBP10.46□□□□□ -0.73
USP39-206ENST00000448971 IGKV2D-40P01614 121 aaPredicted RBP10.46□□□□□ -0.73
USP39-206ENST00000448971 LEPP41159 167 aa10.46□□□□□ -0.73
USP39-206ENST00000448971 RANP62826 216 aaKnown RBP10.46□□□□□ -0.73
USP39-206ENST00000448971 PQLC2Q6ZP29 291 aa10.46□□□□□ -0.73
USP39-206ENST00000448971 Q6ZTC4 211 aa10.46□□□□□ -0.73
USP39-206ENST00000448971 ZNF767PQ75MW2 155 aa10.46□□□□□ -0.73
USP39-206ENST00000448971 GNPNAT1Q96EK6 184 aaPredicted RBP10.46□□□□□ -0.73
USP39-206ENST00000448971 Q9H3A6 140 aa10.46□□□□□ -0.73
USP39-206ENST00000448971 TEX48A0A1B0GUV7 120 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 C11orf94C9JXX5 98 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 MBP02144 154 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 HTN1P15515 57 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 CSN1S1P47710 185 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 SERF2P84101 59 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 ERCC8Q13216 396 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 TMEM256Q8N2U0 113 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 ODF3Q96PU9 254 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 LINC01587Q99440 93 aa10.45□□□□□ -0.74
USP39-206ENST00000448971 YTHDF2Q9Y5A9 579 aaKnown RBP10.45□□□□□ -0.74
USP39-206ENST00000448971 ZNF705GA8MUZ8 300 aaPredicted RBP10.44□□□□□ -0.74
USP39-206ENST00000448971 TAAR5O14804 337 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 SPART-AS1P0CW21 52 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 ARL14EPLP0DKL9 152 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 CT45A10P0DMU9 189 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 TMEM78Q5T7P6 136 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 FAM222AQ5U5X8 452 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 GFI1BQ5VTD9 330 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 LYPD1Q8N2G4 141 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 RPH3ALQ9UNE2 315 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 DNAH6Q9C0G6 4158 aa10.44□□□□□ -0.74
USP39-206ENST00000448971 TRAV10A0A0B4J240 114 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 ZNF345Q14585 488 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 KIR3DS1Q14943 382 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 FAM74A1Q5RGS3 127 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 LGALS9CQ6DKI2 356 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 IQCF2Q8IXL9 164 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 CMTM2Q8TAZ6 248 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 C2CD4CQ8TF44 421 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 RAB24Q969Q5 203 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 HYLS1Q96M11 299 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 C20orf144Q9BQM9 153 aa10.43□□□□□ -0.74
USP39-206ENST00000448971 H7BYZ3 331 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 STAG3L2P0CL84 134 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 STAG3L3P0CL85 134 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 TAS2R60P59551 318 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 C12orf74Q32Q52 190 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 AKR1C8PQ5T2L2 129 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 C16orf74Q96GX8 76 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 LINC00477Q96M19 166 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 ARPC5LQ9BPX5 153 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 NIPSNAP3BQ9BS92 247 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 ACTR3CQ9C0K3 210 aaPredicted RBP10.42□□□□□ -0.74
USP39-206ENST00000448971 OTORQ9NRC9 128 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 DKK2Q9UBU2 259 aa10.42□□□□□ -0.74
USP39-206ENST00000448971 TRAV12-3A0A0B4J271 114 aa10.41□□□□□ -0.74
USP39-206ENST00000448971 PRM2P04554 102 aa10.41□□□□□ -0.74
USP39-206ENST00000448971 C9orf47Q6ZRZ4 202 aa10.41□□□□□ -0.74
USP39-206ENST00000448971 Q8TAT8 98 aa10.41□□□□□ -0.74
USP39-206ENST00000448971 RXFP4Q8TDU9 374 aa10.41□□□□□ -0.74
USP39-206ENST00000448971 VGLL1Q99990 258 aa10.41□□□□□ -0.74
USP39-206ENST00000448971 AGPAT4-IT1Q9H0P7 198 aa10.41□□□□□ -0.74
USP39-206ENST00000448971 DEFB131BA0A096LNP1 70 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 KANTRA0A1W2PQU2 76 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 C7orf71A4D174 169 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 PGPA6NDG6 321 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 IGLL5B9A064 214 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 CXorf1O96002 111 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 SLC25A5P05141 298 aaKnown RBP10.4□□□□□ -0.74
USP39-206ENST00000448971 GCHFRP30047 84 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 BTN1A1Q13410 526 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 KCNRGQ8N5I3 272 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 OR11H4Q8NGC9 324 aa10.4□□□□□ -0.74
USP39-206ENST00000448971 CTXND1A0A1B0GTU2 59 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 RBAKDNA6NC62 111 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 HMSDA8MTL9 139 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 DIRC3C9JPN6 131 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 BCL2L11O43521 198 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 PFDN1O60925 122 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 GPX1P07203 203 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 HTN3P15516 51 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 AZU1P20160 251 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 ZNF138P52744 262 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 DAD1P61803 113 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 SSX7Q7RTT5 188 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 CCDC28AQ8IWP9 274 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 TMEM263Q8WUH6 116 aaKnown RBP10.39□□□□□ -0.75
USP39-206ENST00000448971 ZNF471Q9BX82 626 aaPredicted RBP10.39□□□□□ -0.75
USP39-206ENST00000448971 CYTL1Q9NRR1 136 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 TMEM167BQ9NRX6 74 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 ZNF492Q9P255 531 aa10.39□□□□□ -0.75
USP39-206ENST00000448971 hCG_2014768A0A024R1R8 64 aa10.38□□□□□ -0.75
USP39-206ENST00000448971 A0A0D9SG52 128 aa10.38□□□□□ -0.75
USP39-206ENST00000448971 LYRM9A8MSI8 78 aa10.38□□□□□ -0.75
USP39-206ENST00000448971 KLLNB2CW77 178 aa10.38□□□□□ -0.75
USP39-206ENST00000448971 CRISP2P16562 243 aa10.38□□□□□ -0.75
USP39-206ENST00000448971 RNASE4P34096 147 aaKnown RBP10.38□□□□□ -0.75
USP39-206ENST00000448971 FAM19A4Q96LR4 140 aa10.38□□□□□ -0.75
USP39-206ENST00000448971 PYGO2Q9BRQ0 406 aa10.38□□□□□ -0.75
USP39-206ENST00000448971 FAT2Q9NYQ8 4349 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms