RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 C11orf94C9JXX5 98 aa9.98□□□□□ -0.81
PDLIM2-213ENST00000448520 SNRPD3P62318 126 aaKnown RBP9.98□□□□□ -0.81
PDLIM2-213ENST00000448520 PSG9Q00887 426 aa9.98□□□□□ -0.81
PDLIM2-213ENST00000448520 CST9LP1Q5W188 147 aa9.98□□□□□ -0.81
PDLIM2-213ENST00000448520 LYPD6BQ8NI32 183 aa9.98□□□□□ -0.81
PDLIM2-213ENST00000448520 AAMDCQ9H7C9 122 aa9.98□□□□□ -0.81
PDLIM2-213ENST00000448520 OTORQ9NRC9 128 aa9.98□□□□□ -0.81
PDLIM2-213ENST00000448520 IGKV2-40A0A087WW87 121 aaPredicted RBP9.97□□□□□ -0.81
PDLIM2-213ENST00000448520 IGKV2D-40P01614 121 aaPredicted RBP9.97□□□□□ -0.81
PDLIM2-213ENST00000448520 SLC25A5P05141 298 aaKnown RBP9.97□□□□□ -0.81
PDLIM2-213ENST00000448520 SUMO1P63165 101 aaKnown RBP9.97□□□□□ -0.81
PDLIM2-213ENST00000448520 RPUSD4Q96CM3 377 aaKnown RBP9.97□□□□□ -0.81
PDLIM2-213ENST00000448520 A0A1W2PRE2 83 aa9.96□□□□□ -0.82
PDLIM2-213ENST00000448520 RGS13O14921 159 aa9.96□□□□□ -0.82
PDLIM2-213ENST00000448520 ACTL10Q5JWF8 245 aa9.96□□□□□ -0.82
PDLIM2-213ENST00000448520 MORN3Q6PF18 240 aaPredicted RBP9.96□□□□□ -0.82
PDLIM2-213ENST00000448520 LOC102723971A0A1B0GUV8 181 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 BCL2P10415 239 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 MIFP14174 115 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 HIST1H1AQ02539 215 aaPredicted RBP9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 ERCC8Q13216 396 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 CLLU1Q5K131 121 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 SAMD13Q5VXD3 122 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 LYPD1Q8N2G4 141 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 SGK494Q96LW2 274 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 MANBALQ9NQG1 85 aa9.95□□□□□ -0.82
PDLIM2-213ENST00000448520 IGLL5B9A064 214 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 DEFB4AO15263 64 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 RAB14P61106 215 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 TOR2AQ5JU69 321 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 GOLT1AQ6ZVE7 132 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 Q8NAQ8 132 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 OR8A1Q8NGG7 326 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 CMTM2Q8TAZ6 248 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 RXFP4Q8TDU9 374 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 MRPL53Q96EL3 112 aaKnown RBP9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 VGLL1Q99990 258 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 SAV1Q9H4B6 383 aaPredicted RBP9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 APLNQ9ULZ1 77 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 PRELID1Q9Y255 219 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 DNAH10Q8IVF4 4471 aa9.94□□□□□ -0.82
PDLIM2-213ENST00000448520 TRAV8-1A0A0A6YYK1 113 aa9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 A0A0J9YX75 114 aa9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 RBFOX3A6NFN3 312 aa9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 GIG44P09565 113 aaPredicted RBP9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 PPT1P50897 306 aa9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 CNN1P51911 297 aaKnown RBP9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 SRSF3P84103 164 aaKnown RBP9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 FOXI2Q6ZQN5 318 aa9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 TRPT1Q86TN4 253 aaKnown RBP9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 CCDC28AQ8IWP9 274 aa9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 KRTAP17-1Q9BYP8 105 aa9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 EPDR1Q9UM22 224 aa9.93□□□□□ -0.82
PDLIM2-213ENST00000448520 TRAV34A0A0B4J273 112 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 H3BMM0 161 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 IFNA1P01562 189 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 TCRAP04437 139 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 RBMY1A1P0DJD3 496 aaKnown RBP9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 RBMY1CP0DJD4 496 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 CSN1S1P47710 185 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 FXYD7P58549 80 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 RBMY1FQ15415 496 aaKnown RBP9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 ZNF506Q5JVG8 444 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 OR4B1Q8NGF8 309 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 Q8TAT8 98 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 LINC00479Q96M42 142 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 FAM210AQ96ND0 272 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 VAX2Q9UIW0 290 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 ARL2-SNX15V9GYD0 113 aa9.92□□□□□ -0.82
PDLIM2-213ENST00000448520 DNAH6Q9C0G6 4158 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 TRAV10A0A0B4J240 114 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 IGHV4-28A0A0C4DH34 117 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 C9JQL5 133 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 PEX7O00628 323 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 HLA-DRB4P13762 266 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 MEF2BQ02080 365 aaPredicted RBP9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 EBLN2Q6P2I7 272 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 AGPAT4-IT1Q9H0P7 198 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 CLEC5AQ9NY25 188 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 HLA-DRB4X5D2U9 266 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 VPS13DQ5THJ4 4388 aa9.91□□□□□ -0.82
PDLIM2-213ENST00000448520 NPIPB6E9PJ23 425 aa9.9□□□□□ -0.82
PDLIM2-213ENST00000448520 NUTF2P61970 127 aaKnown RBP9.9□□□□□ -0.82
PDLIM2-213ENST00000448520 AMTNQ6UX39 209 aa9.9□□□□□ -0.82
PDLIM2-213ENST00000448520 OR10J6PQ8NGY7 276 aa9.9□□□□□ -0.82
PDLIM2-213ENST00000448520 ATG101Q9BSB4 218 aa9.9□□□□□ -0.82
PDLIM2-213ENST00000448520 DERL1Q9BUN8 251 aa9.9□□□□□ -0.82
PDLIM2-213ENST00000448520 EIF5A2Q9GZV4 153 aaKnown RBP9.9□□□□□ -0.82
PDLIM2-213ENST00000448520 SLC35B3Q9H1N7 401 aa9.9□□□□□ -0.82
PDLIM2-213ENST00000448520 IGLV2-11P01706 119 aa9.89□□□□□ -0.83
PDLIM2-213ENST00000448520 CT45A10P0DMU9 189 aa9.89□□□□□ -0.83
PDLIM2-213ENST00000448520 AKR1C3P42330 323 aa9.89□□□□□ -0.83
PDLIM2-213ENST00000448520 KIR3DS1Q14943 382 aa9.89□□□□□ -0.83
PDLIM2-213ENST00000448520 CYB561D1Q8N8Q1 229 aa9.89□□□□□ -0.83
PDLIM2-213ENST00000448520 CSNK1G2-AS1Q8NCQ2 148 aa9.89□□□□□ -0.83
PDLIM2-213ENST00000448520 C1QTNF4Q9BXJ3 329 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms