RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 NOP10Q9NPE3 64 aaKnown RBP7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 ZNF586Q9NXT0 402 aa7.77□□□□□ -1.17
NPIPB3-202ENST00000448012 HYDINQ4G0P3 5121 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 TRAV12-3A0A0B4J271 114 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 PRAC2D3DTV9 90 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 NPIPB6E9PJ23 425 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 IFNA7P01567 189 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 PRM2P04554 102 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 SLC25A5P05141 298 aaKnown RBP7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 PRB4P10163 310 aaPredicted RBP7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 CSN1S1P47710 185 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 CCL18P55774 89 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 LGALS9BQ3B8N2 356 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 TMEM78Q5T7P6 136 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 GFI1BQ5VTD9 330 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 KCNRGQ8N5I3 272 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 INO80EQ8NBZ0 244 aaPredicted RBP7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 LINC00477Q96M19 166 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 PYGO2Q9BRQ0 406 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 MRPL32Q9BYC8 188 aaKnown RBP7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 OR5AC2Q9NZP5 309 aa7.76□□□□□ -1.17
NPIPB3-202ENST00000448012 IGLV2-18A0A075B6J9 118 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 KANTRA0A1W2PQU2 76 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 RNF222A6NCQ9 220 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 BCL2L11O43521 198 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 PYYP10082 97 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 TAS2R45P59539 299 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 TEX261Q6UWH6 196 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 ZNF680Q8NEM1 530 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 RNASE8Q8TDE3 154 aaKnown RBP7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 ATP5SQ99766 215 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 PAXXQ9BUH6 204 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 PARD6GQ9BYG4 376 aaPredicted RBP7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 WDR61Q9GZS3 305 aaKnown RBP7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 OR51M1Q9H341 326 aa7.75□□□□□ -1.17
NPIPB3-202ENST00000448012 C7orf71A4D174 169 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 PRSS29PA6NIE9 313 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 OR7C2O60412 319 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 GPX1P07203 203 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 NBEAP1P0C6P0 100 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 CT45A10P0DMU9 189 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 OR5I1Q13606 314 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 ICAM4Q14773 271 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 FAM122CQ6P4D5 195 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 SLC51BQ86UW2 128 aa7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 EPPK1P58107 5090 aaKnown RBP7.74□□□□□ -1.17
NPIPB3-202ENST00000448012 TRGV2A0A075B6R0 118 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 GAGE12BA1L429 117 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 H0YIZ8 118 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 M0R3E3 92 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 GAGE7O76087 117 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 GAGE12FP0CL80 117 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 GAGE12GP0CL81 117 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 GAGE12IP0CL82 117 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 GCSAMLQ5JQS6 135 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 C1orf134Q5TEV5 83 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 MIR17HGQ75NE6 70 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 EXOC3-AS1Q8N2X6 119 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 RNF141Q8WVD5 230 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 GNPNAT1Q96EK6 184 aaPredicted RBP7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 AQP10Q96PS8 301 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 ARPC5LQ9BPX5 153 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 SLC25A2Q9BXI2 301 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 FUT9Q9Y231 359 aa7.73□□□□□ -1.17
NPIPB3-202ENST00000448012 PLAC8L1A1L4L8 177 aa7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 NMBP08949 121 aa7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 M6PRP20645 277 aa7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 RPL12P30050 165 aaKnown RBP7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 RNASE4P34096 147 aaKnown RBP7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 UBE2L3P68036 154 aaKnown RBP7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 ERCC8Q13216 396 aa7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 KIR3DS1Q14943 382 aa7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 KHDC3LQ587J8 217 aa7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 FFAR4Q5NUL3 377 aa7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 FAM74A1Q5RGS3 127 aa7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 BIRC6Q9NR09 4857 aa7.72□□□□□ -1.17
NPIPB3-202ENST00000448012 IGKV2-40A0A087WW87 121 aaPredicted RBP7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 A0A1W2PPV4 95 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 NDUFB4O95168 129 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 IGKV2D-40P01614 121 aaPredicted RBP7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 OR10J4P0C629 311 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 RAB14P61106 215 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 RANP62826 216 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 DAZ2Q13117 558 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 ACOT6Q3I5F7 207 aaPredicted RBP7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 C9orf47Q6ZRZ4 202 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 LYPD1Q8N2G4 141 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 EIF4E3Q8N5X7 224 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 CMTM2Q8TAZ6 248 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 RXFP4Q8TDU9 374 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 ZNF471Q9BX82 626 aaPredicted RBP7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 SMIM3Q9BZL3 60 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 AGPAT4-IT1Q9H0P7 198 aa7.71□□□□□ -1.18
NPIPB3-202ENST00000448012 TRAV26-1A0A087WT03 109 aa7.7□□□□□ -1.18
NPIPB3-202ENST00000448012 TRGV1A0A0A0MS02 117 aa7.7□□□□□ -1.18
NPIPB3-202ENST00000448012 ZNF138P52744 262 aa7.7□□□□□ -1.18
NPIPB3-202ENST00000448012 CLLU1Q5K131 121 aa7.7□□□□□ -1.18
NPIPB3-202ENST00000448012 STOML3Q8TAV4 291 aa7.7□□□□□ -1.18
NPIPB3-202ENST00000448012 PHYHIPLQ96FC7 376 aa7.7□□□□□ -1.18
NPIPB3-202ENST00000448012 FAM167A-AS1Q96KT0 104 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms