RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 CACNG7P62955 275 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 MLLT11Q13015 90 aaPredicted RBP6.23□□□□□ -1.41
HDAC8-215ENST00000444609 TMEM182Q6ZP80 229 aaPredicted RBP6.23□□□□□ -1.41
HDAC8-215ENST00000444609 ARL6IP6Q8N6S5 226 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 MCFD2Q8NI22 146 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 TP53RKQ96S44 253 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 AUNIPQ9H7T9 357 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 KLK12Q9UKR0 248 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 SSR3Q9UNL2 185 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 U3KQ87 197 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 IGHV3-16A0A0C4DH30 117 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 TEX13DA0A0J9YY54 714 aaPredicted RBP6.22□□□□□ -1.41
HDAC8-215ENST00000444609 RGS13O14921 159 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 CXCL2P19875 107 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 RNASE4P34096 147 aaKnown RBP6.22□□□□□ -1.41
HDAC8-215ENST00000444609 NIT1Q86X76 327 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 SLC25A29Q8N8R3 303 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 CCDC71LQ8N9Z2 235 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 OR5H2Q8NGV7 314 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 SVIPQ8NHG7 77 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 SH3BGRL3Q9H299 93 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 OR51M1Q9H341 326 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 RHBDL2Q9NX52 303 aa6.22□□□□□ -1.41
HDAC8-215ENST00000444609 PMS2P5A8MQ11 134 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 MRPS12O15235 138 aaKnown RBP6.21□□□□□ -1.42
HDAC8-215ENST00000444609 UPK1BO75841 260 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
HDAC8-215ENST00000444609 BCAP31P51572 246 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 UCP3P55916 312 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 CNBPP62633 177 aaKnown RBP6.21□□□□□ -1.42
HDAC8-215ENST00000444609 OPCMLQ14982 345 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 Q6ZQT7 251 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 LGI3Q8N145 548 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 FAM19A4Q96LR4 140 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 SLC50A1Q9BRV3 221 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 PRADC1Q9BSG0 188 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 C1orf43Q9BWL3 253 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 SDF2L1Q9HCN8 221 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 NDUFB11Q9NX14 153 aa6.21□□□□□ -1.42
HDAC8-215ENST00000444609 IGHV3-64A0A075B6Q5 118 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 LOC100506127A0A0U1RQW1 187 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 TAS2R46P59540 309 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 RND3P61587 244 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 LCN15Q6UWW0 184 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 OR4D10Q8NGI6 311 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 OR10G9Q8NGN4 311 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 OR1S1Q8NH92 325 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 RNASE11Q8TAA1 199 aaKnown RBP6.2□□□□□ -1.42
HDAC8-215ENST00000444609 CHAC2Q8WUX2 184 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 CCDC32Q9BV29 185 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 IFT46Q9NQC8 304 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 ANAPC10Q9UM13 185 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 URGCP-MRPS24S4R325 110 aa6.2□□□□□ -1.42
HDAC8-215ENST00000444609 MUC21A0A0G2JKD1 596 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 C3orf85A0A1B0GTC6 90 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 MYL9P24844 172 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 TGFBR1P36897 503 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 CCR6P51684 374 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 DEFA1P59665 94 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 DEFA3P59666 94 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 Q0VG73 95 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 SP6Q3SY56 376 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 SPANXN2Q5MJ10 180 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 LYSMD2Q8IV50 215 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 LYPD6BQ8NI32 183 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 SPXQ9BT56 116 aa6.19□□□□□ -1.42
HDAC8-215ENST00000444609 A0A0A6YYH2 397 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 TRBV6-4A0A1B0GX49 114 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 SMIM30A4D0T7 59 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 A6NJ64 397 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 PTTG1O95997 202 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 GPX1P07203 203 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 SNRPCP09234 159 aaKnown RBP6.18□□□□□ -1.42
HDAC8-215ENST00000444609 OR4E1P0C645 316 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 ATP5IP56385 69 aaPredicted RBP6.18□□□□□ -1.42
HDAC8-215ENST00000444609 RAP2BP61225 183 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 POLR2GP62487 172 aaKnown RBP eCLIP6.18□□□□□ -1.42
HDAC8-215ENST00000444609 IFITM3Q01628 133 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 ELOBQ15370 118 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 RHOHQ15669 191 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 Q6ZRP5 223 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 ACOT7LQ6ZUV0 252 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 OR52I2Q8NH67 350 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 HIGD1AQ9Y241 93 aa6.18□□□□□ -1.42
HDAC8-215ENST00000444609 TRDV1A0A1B0GX56 115 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 NOTOA8MTQ0 251 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 SLC17A3O00476 420 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 APOA1P02647 267 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 CRISP2P16562 243 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 ANXA7P20073 488 aaKnown RBP6.17□□□□□ -1.42
HDAC8-215ENST00000444609 RPS19P39019 145 aaKnown RBP6.17□□□□□ -1.42
HDAC8-215ENST00000444609 TSPAN5P62079 268 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 ERCC8Q13216 396 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 TMEM75Q8N9X5 138 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 AP3S1Q92572 193 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 SLC25A38Q96DW6 304 aa6.17□□□□□ -1.42
HDAC8-215ENST00000444609 TXNL4BQ9NX01 149 aaKnown RBP6.17□□□□□ -1.42
HDAC8-215ENST00000444609 A0A087WWC5 75 aa6.16□□□□□ -1.42
HDAC8-215ENST00000444609 HYPMO75409 117 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms