RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 DEFB130BP0DP73 79 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 DEFB130AP0DP74 79 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 HTN1P15515 57 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 LEPP41159 167 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 CSN1S1P47710 185 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 SERF2P84101 59 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 ICAM4Q14773 271 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 Q5BKY6 102 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 PQLC2Q6ZP29 291 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 LYPD1Q8N2G4 141 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 GNPNAT1Q96EK6 184 aaPredicted RBP7.65□□□□□ -1.18
SF3A1-203ENST00000444440 LINC00477Q96M19 166 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 C20orf144Q9BQM9 153 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 PSMG3Q9BT73 122 aaPredicted RBP7.65□□□□□ -1.18
SF3A1-203ENST00000444440 TNFSF18Q9UNG2 199 aa7.65□□□□□ -1.18
SF3A1-203ENST00000444440 DNAH5Q8TE73 4624 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 TAAR5O14804 337 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 OR10J4P0C629 311 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 TAS2R60P59551 318 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 UBE2L3P68036 154 aaKnown RBP7.64□□□□□ -1.19
SF3A1-203ENST00000444440 EXOC3-AS1Q8N2X6 119 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 HSD17B11Q8NBQ5 300 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 OR10G4Q8NGN3 311 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 OR10G9Q8NGN4 311 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 OR10G7Q8NGN6 311 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 FXYD5Q96DB9 178 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 ODF3Q96PU9 254 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 MUC4Q99102 2169 aa7.64□□□□□ -1.19
SF3A1-203ENST00000444440 IGLV2-18A0A075B6J9 118 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 TRAV12-3A0A0B4J271 114 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 RTL8CO15255 209 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 EIF3GO75821 320 aaKnown RBP eCLIP7.63□□□□□ -1.19
SF3A1-203ENST00000444440 RANP62826 216 aaKnown RBP7.63□□□□□ -1.19
SF3A1-203ENST00000444440 FAM74A1Q5RGS3 127 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 TMEM78Q5T7P6 136 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 FAM122CQ6P4D5 195 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 Q6ZQT7 251 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 CCDC28AQ8IWP9 274 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 OR2G3Q8NGZ4 309 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 RXFP4Q8TDU9 374 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 TMEM263Q8WUH6 116 aaKnown RBP7.63□□□□□ -1.19
SF3A1-203ENST00000444440 ZNF503Q96F45 646 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 C16orf74Q96GX8 76 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 FAM210BQ96KR6 192 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 FAM19A4Q96LR4 140 aa7.63□□□□□ -1.19
SF3A1-203ENST00000444440 NOP10Q9NPE3 64 aaKnown RBP7.63□□□□□ -1.19
SF3A1-203ENST00000444440 LRP1BQ9NZR2 4599 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 IGKV2-40A0A087WW87 121 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-203ENST00000444440 A0A1B0GVY2 172 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 H7BYZ3 331 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 IGKV2D-40P01614 121 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-203ENST00000444440 SLC25A5P05141 298 aaKnown RBP7.62□□□□□ -1.19
SF3A1-203ENST00000444440 ATP6V0CP27449 155 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 CDC34P49427 236 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-203ENST00000444440 CD300CQ08708 224 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 PRR9Q5T870 116 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 Q6ZR54 194 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 C9orf47Q6ZRZ4 202 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 LINC00612Q8N6U2 182 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 PHYHIPLQ96FC7 376 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 AGPAT4-IT1Q9H0P7 198 aa7.62□□□□□ -1.19
SF3A1-203ENST00000444440 HSPG2P98160 4391 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 RBAKDNA6NC62 111 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 RNF222A6NCQ9 220 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 ARPC5O15511 151 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 ZNF324O75467 553 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-203ENST00000444440 NMBP08949 121 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 RAB2AP61019 212 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 BTN1A1Q13410 526 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 RPL7L1Q6DKI1 246 aaKnown RBP7.61□□□□□ -1.19
SF3A1-203ENST00000444440 ZNF493Q6ZR52 646 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 CMTM2Q8TAZ6 248 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 VGLL1Q99990 258 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 ACTR3CQ9C0K3 210 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-203ENST00000444440 Q9H3A6 140 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 OTORQ9NRC9 128 aa7.61□□□□□ -1.19
SF3A1-203ENST00000444440 TIMM8BQ9Y5J9 83 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-203ENST00000444440 PGPA6NDG6 321 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 CBY3A6NI87 242 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 KLLNB2CW77 178 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 F5H768 121 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 GPX1P07203 203 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 HOXA5P20719 270 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 UBE2DNLQ8IWF7 75 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 ARL6IP6Q8N6S5 226 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 RAB24Q969Q5 203 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 APOBP04114 4563 aaKnown RBP7.6□□□□□ -1.19
SF3A1-203ENST00000444440 RYR1P21817 5038 aa7.6□□□□□ -1.19
SF3A1-203ENST00000444440 A0A0D9SG52 128 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 TRBV7-9A0A0J9YWB2 115 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 C7orf71A4D174 169 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 HMSDA8MTL9 139 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 CXorf1O96002 111 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 ATP5G1P05496 136 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 STAG3L2P0CL84 134 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 STAG3L3P0CL85 134 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 ARL14EPLP0DKL9 152 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 RNASE4P34096 147 aaKnown RBP7.59□□□□□ -1.19
SF3A1-203ENST00000444440 ATP5G3P48201 142 aa7.59□□□□□ -1.19
SF3A1-203ENST00000444440 ZNF138P52744 262 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms