RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SHANK2-AS3Q9BTD1 123 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 SLC25A39Q9BZJ4 359 aaPredicted RBP6.44□□□□□ -1.38
USP6NL-203ENST00000443016 MAP1LC3BQ9GZQ8 125 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 A0A1W2PPQ1 181 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 VCYO14598 125 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 SNAI2O43623 268 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 OR7C2O60412 319 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 CXorf1O96002 111 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 CA1P00915 261 aaPredicted RBP6.44□□□□□ -1.38
USP6NL-203ENST00000443016 GCSHP23434 173 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 IFITM2Q01629 132 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 PQLC2Q6ZP29 291 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 RPP25LQ8N5L8 163 aaKnown RBP6.44□□□□□ -1.38
USP6NL-203ENST00000443016 TMEM37Q8WXS4 190 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 UHRF2Q96PU4 802 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 NAGKQ9UJ70 344 aa6.44□□□□□ -1.38
USP6NL-203ENST00000443016 TRAV2A0A0B4J234 112 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 RAB19A4D1S5 217 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 RPL7P18124 248 aaKnown RBP6.43□□□□□ -1.38
USP6NL-203ENST00000443016 C1orf194Q5T5A4 169 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 PATE2Q6UY27 113 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 BPIFA4PQ86YQ2 179 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 SFT2D1Q8WV19 159 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 SCRT1Q9BWW7 348 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 NUPR2A6NF83 97 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 ZNF688P0C7X2 276 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 FHITP49789 147 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 LCN15Q6UWW0 184 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 MIR17HGQ75NE6 70 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 OR8I2Q8N0Y5 310 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 FAM24BQ8N5W8 94 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 OR11H2Q8NH07 326 aa6.43□□□□□ -1.38
USP6NL-203ENST00000443016 ZNF98A6NK75 572 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 GALR1P47211 349 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 UBE2L3P68036 154 aaKnown RBP6.42□□□□□ -1.38
USP6NL-203ENST00000443016 IFNA1P01562 189 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 ARL14EPLP0DKL9 152 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 HERV-K104P63124 156 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 CLLU1Q5K131 121 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 SPATA31B1PQ5VZV4 182 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 MBD3L1Q8WWY6 194 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 PAXXQ9BUH6 204 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 TMEM167BQ9NRX6 74 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 PLA2G2EQ9NZK7 142 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 TMEM14CQ9P0S9 112 aa6.42□□□□□ -1.38
USP6NL-203ENST00000443016 KLK5Q9Y337 293 aaPredicted RBP6.42□□□□□ -1.38
USP6NL-203ENST00000443016 TRAV1-1A0A0B4J248 108 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 K7EQG2 157 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 BUB3O43684 328 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 LY6G6CO95867 125 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 NMBP08949 121 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 PSMB3P49720 205 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 MEOX2P50222 304 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 SNRPD3P62318 126 aaKnown RBP6.41□□□□□ -1.38
USP6NL-203ENST00000443016 ZNF726P1Q15940 193 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 ACTL10Q5JWF8 245 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 SLC25A2Q9BXI2 301 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 OR51M1Q9H341 326 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 HMGB3O15347 200 aaKnown RBP6.41□□□□□ -1.38
USP6NL-203ENST00000443016 RS1O15537 224 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 PSMG4Q5JS54 123 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 DCANP1Q8TF63 244 aa6.41□□□□□ -1.38
USP6NL-203ENST00000443016 A0A1B0GV50 99 aa6.4□□□□□ -1.38
USP6NL-203ENST00000443016 GCHFRP30047 84 aa6.4□□□□□ -1.38
USP6NL-203ENST00000443016 FGF8P55075 233 aaPredicted RBP6.4□□□□□ -1.38
USP6NL-203ENST00000443016 GUK1Q16774 197 aa6.4□□□□□ -1.38
USP6NL-203ENST00000443016 SAMD13Q5VXD3 122 aa6.4□□□□□ -1.38
USP6NL-203ENST00000443016 CEMP1Q6PRD7 247 aaPredicted RBP6.4□□□□□ -1.38
USP6NL-203ENST00000443016 SSX7Q7RTT5 188 aa6.4□□□□□ -1.38
USP6NL-203ENST00000443016 C11orf45Q8TAV5 145 aa6.4□□□□□ -1.38
USP6NL-203ENST00000443016 NRN1Q9NPD7 142 aa6.4□□□□□ -1.38
USP6NL-203ENST00000443016 MANBALQ9NQG1 85 aa6.4□□□□□ -1.38
USP6NL-203ENST00000443016 TRAV5A0A0B4J249 113 aa6.4□□□□□ -1.39
USP6NL-203ENST00000443016 KNCNA6PVL3 124 aa6.4□□□□□ -1.39
USP6NL-203ENST00000443016 M0QXV9 152 aa6.4□□□□□ -1.39
USP6NL-203ENST00000443016 DEFB4AO15263 64 aa6.4□□□□□ -1.39
USP6NL-203ENST00000443016 HIST1H1EP10412 219 aaKnown RBP6.4□□□□□ -1.39
USP6NL-203ENST00000443016 MORN5Q5VZ52 161 aa6.4□□□□□ -1.39
USP6NL-203ENST00000443016 FAM167A-AS1Q96KT0 104 aa6.4□□□□□ -1.39
USP6NL-203ENST00000443016 AGRNO00468 2067 aa6.4□□□□□ -1.39
USP6NL-203ENST00000443016 PLECQ15149 4684 aaKnown RBP6.4□□□□□ -1.39
USP6NL-203ENST00000443016 OR10J4P0C629 311 aa6.39□□□□□ -1.39
USP6NL-203ENST00000443016 RNF151Q2KHN1 245 aa6.39□□□□□ -1.39
USP6NL-203ENST00000443016 LINC01620Q4KN68 170 aa6.39□□□□□ -1.39
USP6NL-203ENST00000443016 MORN3Q6PF18 240 aaPredicted RBP6.39□□□□□ -1.39
USP6NL-203ENST00000443016 PHLDA1Q8WV24 401 aaPredicted RBP6.39□□□□□ -1.39
USP6NL-203ENST00000443016 PCNPQ8WW12 178 aaKnown RBP6.39□□□□□ -1.39
USP6NL-203ENST00000443016 ARL2-SNX15V9GYD0 113 aa6.39□□□□□ -1.39
USP6NL-203ENST00000443016 EIF3GO75821 320 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP6NL-203ENST00000443016 PYYP10082 97 aa6.39□□□□□ -1.39
USP6NL-203ENST00000443016 NUTF2P61970 127 aaKnown RBP6.39□□□□□ -1.39
USP6NL-203ENST00000443016 PDE6HQ13956 83 aa6.39□□□□□ -1.39
USP6NL-203ENST00000443016 TRPT1Q86TN4 253 aaKnown RBP6.39□□□□□ -1.39
USP6NL-203ENST00000443016 LINC00476Q8WZB0 136 aa6.39□□□□□ -1.39
USP6NL-203ENST00000443016 GNG13Q9P2W3 67 aa6.39□□□□□ -1.39
USP6NL-203ENST00000443016 DNAH1Q9P2D7 4330 aa6.39□□□□□ -1.39
USP6NL-203ENST00000443016 HYDINQ4G0P3 5121 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 NBEAP1P0C6P0 100 aa6.38□□□□□ -1.39
USP6NL-203ENST00000443016 NANOS2P60321 138 aaKnown RBP6.38□□□□□ -1.39
USP6NL-203ENST00000443016 LYPD6BQ8NI32 183 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms