RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 GPR183P32249 361 aa12.83□□□□□ -0.35
SEMA3B-207ENST00000441915 IGFL4Q6B9Z1 124 aa12.83□□□□□ -0.35
SEMA3B-207ENST00000441915 PEF1Q9UBV8 284 aaKnown RBP12.83□□□□□ -0.35
SEMA3B-207ENST00000441915 SVEP1Q4LDE5 3571 aa12.83□□□□□ -0.35
SEMA3B-207ENST00000441915 ZNF80P51504 273 aaPredicted RBP12.83□□□□□ -0.36
SEMA3B-207ENST00000441915 HBDP02042 147 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 ADORA2A-AS1P86434 159 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 IGHV3OR16-8A0A075B7F1 116 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 G3V4G9 280 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 IGHG4P01861 327 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 HLA-DMBP28068 263 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 NHLH1Q02575 133 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 LGALS9BQ3B8N2 356 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 LGALS9CQ6DKI2 356 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 DPF1Q92782 380 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
SEMA3B-207ENST00000441915 ORM1P02763 201 aa12.81□□□□□ -0.36
SEMA3B-207ENST00000441915 Q8N9W7 124 aa12.81□□□□□ -0.36
SEMA3B-207ENST00000441915 MSRB2Q9Y3D2 182 aa12.81□□□□□ -0.36
SEMA3B-207ENST00000441915 SNAI2O43623 268 aa12.81□□□□□ -0.36
SEMA3B-207ENST00000441915 C15orf32Q32M92 178 aa12.81□□□□□ -0.36
SEMA3B-207ENST00000441915 FABP5P3A8MUU1 101 aa12.8□□□□□ -0.36
SEMA3B-207ENST00000441915 SMKR1H3BMG3 65 aa12.8□□□□□ -0.36
SEMA3B-207ENST00000441915 NPYP01303 97 aa12.8□□□□□ -0.36
SEMA3B-207ENST00000441915 ZFP36P26651 326 aaKnown RBP12.8□□□□□ -0.36
SEMA3B-207ENST00000441915 FXYD7P58549 80 aa12.8□□□□□ -0.36
SEMA3B-207ENST00000441915 SRSF2Q01130 221 aaKnown RBP12.8□□□□□ -0.36
SEMA3B-207ENST00000441915 C2orf91Q6ZV80 131 aa12.8□□□□□ -0.36
SEMA3B-207ENST00000441915 RAB9AP51151 201 aa12.8□□□□□ -0.36
SEMA3B-207ENST00000441915 CACNG7P62955 275 aa12.8□□□□□ -0.36
SEMA3B-207ENST00000441915 HRNRQ86YZ3 2850 aaPredicted RBP12.79□□□□□ -0.36
SEMA3B-207ENST00000441915 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
SEMA3B-207ENST00000441915 PAX8Q06710 450 aa12.79□□□□□ -0.36
SEMA3B-207ENST00000441915 OR1N2Q8NGR9 330 aa12.79□□□□□ -0.36
SEMA3B-207ENST00000441915 ECSCRQ19T08 205 aa12.79□□□□□ -0.36
SEMA3B-207ENST00000441915 PIP4P2Q8N4L2 257 aa12.79□□□□□ -0.36
SEMA3B-207ENST00000441915 FAM110DQ8TAY7 271 aaPredicted RBP12.79□□□□□ -0.36
SEMA3B-207ENST00000441915 KLRB1Q12918 225 aa12.78□□□□□ -0.36
SEMA3B-207ENST00000441915 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
SEMA3B-207ENST00000441915 IFI27L1Q96BM0 104 aa12.78□□□□□ -0.36
SEMA3B-207ENST00000441915 MED13LQ71F56 2210 aa12.78□□□□□ -0.36
SEMA3B-207ENST00000441915 BUB3O43684 328 aa12.78□□□□□ -0.36
SEMA3B-207ENST00000441915 CLEC3BP05452 202 aa12.78□□□□□ -0.36
SEMA3B-207ENST00000441915 ZNF575Q86XF7 245 aa12.78□□□□□ -0.36
SEMA3B-207ENST00000441915 CNFNQ9BYD5 112 aa12.78□□□□□ -0.36
SEMA3B-207ENST00000441915 SIRPDQ9H106 197 aa12.78□□□□□ -0.36
SEMA3B-207ENST00000441915 MSRB1Q9NZV6 116 aa12.77□□□□□ -0.36
SEMA3B-207ENST00000441915 GOSR1O95249 250 aa12.77□□□□□ -0.37
SEMA3B-207ENST00000441915 FGF6P10767 208 aa12.77□□□□□ -0.37
SEMA3B-207ENST00000441915 ERCC8Q13216 396 aa12.77□□□□□ -0.37
SEMA3B-207ENST00000441915 DTX2Q86UW9 622 aa12.77□□□□□ -0.37
SEMA3B-207ENST00000441915 MAP1LC3AQ9H492 121 aa12.77□□□□□ -0.37
SEMA3B-207ENST00000441915 ZFAND3Q9H8U3 227 aa12.77□□□□□ -0.37
SEMA3B-207ENST00000441915 SEC11AP67812 179 aa12.76□□□□□ -0.37
SEMA3B-207ENST00000441915 TMEM97Q5BJF2 176 aa12.76□□□□□ -0.37
SEMA3B-207ENST00000441915 UFSP1Q6NVU6 142 aa12.76□□□□□ -0.37
SEMA3B-207ENST00000441915 PRSS57Q6UWY2 283 aa12.76□□□□□ -0.37
SEMA3B-207ENST00000441915 C7orf71A4D174 169 aa12.76□□□□□ -0.37
SEMA3B-207ENST00000441915 GTF2H5Q6ZYL4 71 aa12.76□□□□□ -0.37
SEMA3B-207ENST00000441915 CLUHP3Q96NS8 147 aa12.76□□□□□ -0.37
SEMA3B-207ENST00000441915 SLC50A1Q9BRV3 221 aa12.76□□□□□ -0.37
SEMA3B-207ENST00000441915 PRAC2D3DTV9 90 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 ATP6V0E1O15342 81 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 FOXE3Q13461 319 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 RNF185Q96GF1 192 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 ASH1LQ9NR48 2969 aaKnown RBP12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 RBAKDNA6NC62 111 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 UBE2E1P51965 193 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 LINC01559Q495D7 138 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 SAMD13Q5VXD3 122 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 BOD1L2Q8IYS8 172 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 RNF182Q8N6D2 247 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 NPFFR1Q9GZQ6 430 aa12.75□□□□□ -0.37
SEMA3B-207ENST00000441915 NDUFS7O75251 213 aa12.74□□□□□ -0.37
SEMA3B-207ENST00000441915 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
SEMA3B-207ENST00000441915 IGHV3-66A0A0C4DH42 116 aa12.74□□□□□ -0.37
SEMA3B-207ENST00000441915 UCNP55089 124 aa12.74□□□□□ -0.37
SEMA3B-207ENST00000441915 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 SMAD7O15105 426 aaKnown RBP12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 KLK9Q2XQG4 91 aa12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 CLEC19AQ6UXS0 136 aa12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 OR9G4Q8NGQ1 327 aa12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 KLK9Q9UKQ9 250 aa12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 SPTBN1Q01082 2364 aaKnown RBP12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 TCTAP57738 103 aa12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
SEMA3B-207ENST00000441915 A1L4Q6 167 aa12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 TNFRSF6BO95407 300 aa12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 PPIFP30405 207 aaKnown RBP12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 SAA4P35542 130 aa12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 NEGR1Q7Z3B1 354 aa12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 CCDC140Q96MF4 163 aa12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 C18orf15Q96N68 181 aa12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 PSMG3-AS1Q96PY0 264 aa12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 CLPSL1A2RUU4 121 aa12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 G3V318 75 aa12.72□□□□□ -0.37
SEMA3B-207ENST00000441915 ATRXP46100 2492 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms