RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 FBLL1A6NHQ2 334 aaKnown RBP9.36□□□□□ -0.91
LTBR-203ENST00000441074 K7ERJ3 54 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 LYZP61626 148 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 SRSF1Q07955 248 aaKnown RBP eCLIP9.36□□□□□ -0.91
LTBR-203ENST00000441074 MRGPRG-AS1Q2M3A8 158 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 HHLA3Q9XRX5 114 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 TRBV19A0A075B6N1 114 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 IGKV2D-26A0A0A0MRZ7 120 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 SLC25A17O43808 307 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 MC5RP33032 325 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 TCTEX1D4Q5JR98 221 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 CEND1Q8N111 149 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 LYPD1Q8N2G4 141 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 SPAG8Q99932 426 aaPredicted RBP9.36□□□□□ -0.91
LTBR-203ENST00000441074 TPSG1Q9NRR2 321 aa9.36□□□□□ -0.91
LTBR-203ENST00000441074 IGLL5B9A064 214 aa9.35□□□□□ -0.91
LTBR-203ENST00000441074 CCL3L1P16619 93 aa9.35□□□□□ -0.91
LTBR-203ENST00000441074 RAB9AP51151 201 aa9.35□□□□□ -0.91
LTBR-203ENST00000441074 CKS1BP61024 79 aa9.35□□□□□ -0.91
LTBR-203ENST00000441074 SCGB2A2Q13296 93 aa9.35□□□□□ -0.91
LTBR-203ENST00000441074 NHP2Q9NX24 153 aaKnown RBP9.35□□□□□ -0.91
LTBR-203ENST00000441074 NAV3Q8IVL0 2385 aa9.35□□□□□ -0.91
LTBR-203ENST00000441074 TRBV25-1A0A075B6N4 114 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 IGHV3-21A0A0B4J1V1 117 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 NPYP01303 97 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 CKS2P33552 79 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 ODF1Q14990 250 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 TMEM200BQ69YZ2 307 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 ZNF562Q6V9R5 426 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 ASCL2Q99929 193 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 NGBQ9NPG2 151 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.34□□□□□ -0.91
LTBR-203ENST00000441074 LINC01546A6NGU7 62 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 C17orf100A8MU93 164 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 E7EQL1 145 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 EVI2AP22794 236 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 DIAPH2-AS1Q14236 149 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 SIGLEC15Q6ZMC9 328 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
LTBR-203ENST00000441074 HELZ2Q9BYK8 2649 aaKnown RBP9.34□□□□□ -0.91
LTBR-203ENST00000441074 UBR5O95071 2799 aaPredicted RBP9.34□□□□□ -0.92
LTBR-203ENST00000441074 PRSS47A8MTI9 375 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 RPL27AP46776 148 aaKnown RBP9.33□□□□□ -0.92
LTBR-203ENST00000441074 Q5PR19 223 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 WFDC3Q8IUB2 231 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 ZNF502Q8TBZ5 544 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 AKAP6Q13023 2319 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 NDUFB3O43676 98 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 TAL2Q16559 108 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 LINC01559Q495D7 138 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 CCL17Q92583 94 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 ZNF479Q96JC4 524 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 C17orf77Q96MU5 243 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 C8orf49Q96NF6 230 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 TTTY13Q9BZ97 58 aa9.33□□□□□ -0.92
LTBR-203ENST00000441074 SMKR1H3BMG3 65 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 IGKCP01834 107 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 FCER1GP30273 86 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 ETDBQ3ZM63 59 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 SH2D6Q7Z4S9 175 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 SHANK2-AS3Q9BTD1 123 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 TMEM133Q9H2Q1 129 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 USP9XQ93008 2570 aaPredicted RBP9.32□□□□□ -0.92
LTBR-203ENST00000441074 LYNX1G3V0Z9 82 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 H3BMG7 143 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 LYNX1P0DP58 116 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 PLA2G2AP14555 144 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 ARPC1AQ92747 370 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 MRAP2Q96G30 205 aa9.32□□□□□ -0.92
LTBR-203ENST00000441074 TENM4Q6N022 2769 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 FASNP49327 2511 aaKnown RBP9.31□□□□□ -0.92
LTBR-203ENST00000441074 TMSB15BA0A087X1C1 80 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.31□□□□□ -0.92
LTBR-203ENST00000441074 TMEM178BH3BS89 294 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 SH2D1AO60880 128 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 LY6HO94772 140 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 C12orf74Q32Q52 190 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 GAGE13Q4V321 117 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 KLF17Q5JT82 389 aaPredicted RBP9.31□□□□□ -0.92
LTBR-203ENST00000441074 WFDC12Q8WWY7 111 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 MAP1LC3AQ9H492 121 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 PRO0461Q9UI25 63 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 NPIPB5A8MRT5 1133 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 H3BRN7 92 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 PRSS1P07477 247 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 LEPP41159 167 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 RASL11BQ9BPW5 248 aa9.31□□□□□ -0.92
LTBR-203ENST00000441074 ARFGEF3Q5TH69 2177 aa9.3□□□□□ -0.92
LTBR-203ENST00000441074 TNFRSF13BO14836 293 aaPredicted RBP9.3□□□□□ -0.92
LTBR-203ENST00000441074 ATP5LO75964 103 aa9.3□□□□□ -0.92
LTBR-203ENST00000441074 DPM2O94777 84 aa9.3□□□□□ -0.92
LTBR-203ENST00000441074 DLX6P56179 175 aa9.3□□□□□ -0.92
LTBR-203ENST00000441074 COX8CQ7Z4L0 72 aa9.3□□□□□ -0.92
LTBR-203ENST00000441074 GTSCR1Q86UQ5 136 aa9.3□□□□□ -0.92
LTBR-203ENST00000441074 CENPEQ02224 2701 aa9.3□□□□□ -0.92
LTBR-203ENST00000441074 LRRK2Q5S007 2527 aa9.3□□□□□ -0.92
LTBR-203ENST00000441074 GCN1Q92616 2671 aaKnown RBP9.3□□□□□ -0.92
LTBR-203ENST00000441074 TRAV26-1A0A087WT03 109 aa9.3□□□□□ -0.92
LTBR-203ENST00000441074 J3QKU1 62 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms