RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 HIST1H1AQ02539 215 aaPredicted RBP6.32□□□□□ -1.4
SPIRE1-204ENST00000440472 CLEC19AQ6UXS0 136 aa6.32□□□□□ -1.4
SPIRE1-204ENST00000440472 C9orf47Q6ZRZ4 202 aa6.32□□□□□ -1.4
SPIRE1-204ENST00000440472 KLHDC1Q8N7A1 406 aa6.32□□□□□ -1.4
SPIRE1-204ENST00000440472 ABCA2Q9BZC7 2435 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 IGKV2-40A0A087WW87 121 aaPredicted RBP6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 J3QLI3 93 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 IGKV2D-40P01614 121 aaPredicted RBP6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 CD33P20138 364 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 FAM104BQ5XKR9 115 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 RNASEKQ6P5S7 137 aaKnown RBP6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 Q71RC1 249 aaPredicted RBP6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 FAM19A2Q8N3H0 131 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 GLMPQ8WWB7 406 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 VGLL1Q99990 258 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 IGHV4-30-2A0A087WSY4 118 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 TRAV8-2A0A0B4J237 113 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 TRAV40A0A0B4J280 105 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 TRBV7-9A0A0J9YWB2 115 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 IGLV1-40P01703 118 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 EBLN2Q6P2I7 272 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 LYZL1Q6UWQ5 148 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 PET117Q6UWS5 81 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 C9orf139Q6ZV77 190 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 SPATA12Q7Z6I5 190 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 ZNF575Q86XF7 245 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 TMEM70Q9BUB7 260 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 LAMTOR2Q9Y2Q5 125 aa6.31□□□□□ -1.4
SPIRE1-204ENST00000440472 TRAV9-2A0A087WT02 112 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 IGHV1-24A0A0C4DH33 117 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 LINC01546A6NGU7 62 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 TRGV3P03979 118 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 NTF3P20783 257 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 SSTP61278 116 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 CFHR3Q02985 330 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 TDRG1Q3Y452 100 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 FER1L6-AS1Q8NA97 138 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 TMEM191AQ9H0A3 160 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 UQCR10Q9UDW1 63 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 HSPB8Q9UJY1 196 aa6.3□□□□□ -1.4
SPIRE1-204ENST00000440472 A0A0G2JLM5 398 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 PPBPP02775 128 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 IGLC3P0DOY3 106 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 IGHV4-38-2P0DP08 117 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 ZNF138P52744 262 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 SAMD13Q5VXD3 122 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 SNHG12Q9BXW3 62 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 TACC2O95359 2948 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 IGHV4-4A0A075B6R2 117 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 A0A096LNT2 108 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 K7EMT4 169 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 LEPROTL1O95214 131 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 ARL3P36405 182 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 ZNF80P51504 273 aaPredicted RBP6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 C8orf86Q6ZUL3 223 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 TMEM219Q86XT9 240 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 DEFB125Q8N687 156 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
SPIRE1-204ENST00000440472 SYS1-DBNDD2H3BUS1 97 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 OVOL1O14753 267 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 NUTF2P61970 127 aaKnown RBP6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 ORMDL3Q8N138 153 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 LINC00477Q96M19 166 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 AGPAT4-IT1Q9H0P7 198 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 AP5S1Q9NUS5 200 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 UBR5O95071 2799 aaPredicted RBP6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 CREBBPQ92793 2442 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 RELNP78509 3460 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 PRSS47A8MTI9 375 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 PRAC2D3DTV9 90 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 SOCS3O14543 225 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 EREGO14944 169 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 HLA-DMBP28068 263 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 TMEM78Q5T7P6 136 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 BRD3OSQ6XYD6 125 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 ST20Q9HBF5 79 aa6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 MRPS16Q9Y3D3 137 aaKnown RBP6.28□□□□□ -1.4
SPIRE1-204ENST00000440472 MED13LQ71F56 2210 aa6.27□□□□□ -1.4
SPIRE1-204ENST00000440472 H3BUX3 64 aa6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 SNAI2O43623 268 aa6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 PRB1P04280 392 aa6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 FOXE3Q13461 319 aa6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 MRPL51Q4U2R6 128 aaKnown RBP6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 FA2HQ7L5A8 372 aa6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 APRG1Q8IVJ8 170 aa6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 OR10AG1Q8NH19 301 aa6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 DPF1Q92782 380 aa6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 MS4A6AQ9H2W1 248 aa6.27□□□□□ -1.41
SPIRE1-204ENST00000440472 FSHBP01225 129 aa6.26□□□□□ -1.41
SPIRE1-204ENST00000440472 MED14OSP0DP75 135 aa6.26□□□□□ -1.41
SPIRE1-204ENST00000440472 CACNG7P62955 275 aa6.26□□□□□ -1.41
SPIRE1-204ENST00000440472 LOXL1Q08397 574 aaPredicted RBP6.26□□□□□ -1.41
SPIRE1-204ENST00000440472 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
SPIRE1-204ENST00000440472 ZNF705AQ6ZN79 300 aaPredicted RBP6.26□□□□□ -1.41
SPIRE1-204ENST00000440472 Q8TAT8 98 aa6.26□□□□□ -1.41
SPIRE1-204ENST00000440472 FAM19A4Q96LR4 140 aa6.26□□□□□ -1.41
SPIRE1-204ENST00000440472 PRELID3AQ96N28 172 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms