RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SMIM9A6NGZ8 99 aa9.29□□□□□ -0.92
SMPD4-209ENST00000439886 IGKV2D-40P01614 121 aaPredicted RBP9.29□□□□□ -0.92
SMPD4-209ENST00000439886 TMEM75Q8N9X5 138 aa9.29□□□□□ -0.92
SMPD4-209ENST00000439886 KIR2DL4Q99706 377 aa9.29□□□□□ -0.92
SMPD4-209ENST00000439886 TNRC6BQ9UPQ9 1833 aaKnown RBP9.28□□□□□ -0.92
SMPD4-209ENST00000439886 IGKV2D-26A0A0A0MRZ7 120 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 NDUFS7O75251 213 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 ATP5IP56385 69 aaPredicted RBP9.28□□□□□ -0.92
SMPD4-209ENST00000439886 KLRD1Q13241 179 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
SMPD4-209ENST00000439886 RIF1Q5UIP0 2472 aaKnown RBP9.28□□□□□ -0.92
SMPD4-209ENST00000439886 NPIPB6E9PJ23 425 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 SRSF1Q07955 248 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMPD4-209ENST00000439886 HES1Q14469 280 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 POU2AF1Q16633 256 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 Q6AWC8 147 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 SCNM1Q9BWG6 230 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 CDIP1Q9H305 208 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 MSRB1Q9NZV6 116 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 TACC2O95359 2948 aa9.28□□□□□ -0.92
SMPD4-209ENST00000439886 NDUFB3O43676 98 aa9.27□□□□□ -0.92
SMPD4-209ENST00000439886 GATA1P15976 413 aaPredicted RBP9.27□□□□□ -0.92
SMPD4-209ENST00000439886 CT83Q5H943 113 aa9.27□□□□□ -0.92
SMPD4-209ENST00000439886 GFRA4Q9GZZ7 299 aa9.27□□□□□ -0.92
SMPD4-209ENST00000439886 H3BVH4 76 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 FGF6P10767 208 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 GP9P14770 177 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 TMEM167AQ8TBQ9 72 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 MAP1LC3AQ9H492 121 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 KLF12Q9Y4X4 402 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 APC2O95996 2303 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 IGHV3OR16-13A0A075B7E8 117 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 IGHV3-74A0A0B4J1X5 117 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 IGHV1-46P01743 117 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 EMP1P54849 157 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 LGALS9BQ3B8N2 356 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 LGALS9CQ6DKI2 356 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 MDS2Q8NDY4 140 aa9.27□□□□□ -0.93
SMPD4-209ENST00000439886 DMXL2Q8TDJ6 3036 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 TRAV40A0A0B4J280 105 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 FOXI1Q12951 378 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 LINC00312Q9Y6C7 94 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 NDUFV3P56181 108 aaKnown RBP9.26□□□□□ -0.93
SMPD4-209ENST00000439886 TMEM200BQ69YZ2 307 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 CFAP47Q6ZTR5 3102 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 LOC107984640A0A0U1RRK4 108 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 SNCGO76070 127 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 CGB3P0DN86 165 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 CGB7P0DN87 165 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 FAM27E3Q08E93 113 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 FAM104BQ5XKR9 115 aa9.26□□□□□ -0.93
SMPD4-209ENST00000439886 KALRNO60229 2985 aa9.25□□□□□ -0.93
SMPD4-209ENST00000439886 SH2D1AO60880 128 aa9.25□□□□□ -0.93
SMPD4-209ENST00000439886 MYCNOSP40205 109 aa9.25□□□□□ -0.93
SMPD4-209ENST00000439886 FDCSPQ8NFU4 85 aa9.25□□□□□ -0.93
SMPD4-209ENST00000439886 IGKCP01834 107 aa9.25□□□□□ -0.93
SMPD4-209ENST00000439886 LYPD2Q6UXB3 125 aa9.25□□□□□ -0.93
SMPD4-209ENST00000439886 NRGNQ92686 78 aa9.25□□□□□ -0.93
SMPD4-209ENST00000439886 TMEM8BA6NDV4 472 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 NHLRC4P0CG21 123 aaPredicted RBP9.24□□□□□ -0.93
SMPD4-209ENST00000439886 IFITM1P13164 125 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 TMEM158Q8WZ71 300 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 DYNLRB1Q9NP97 96 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 TRBV25-1A0A075B6N4 114 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 A0A096LNJ9 63 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 GAS8-AS1O95177 125 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 SCGB1D4Q6XE38 83 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 TRGV9Q99603 122 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 PRO3102Q9H379 93 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 ZNF71Q9NQZ8 489 aaPredicted RBP9.24□□□□□ -0.93
SMPD4-209ENST00000439886 SPTAN1Q13813 2472 aaKnown RBP9.24□□□□□ -0.93
SMPD4-209ENST00000439886 IGHV3-66A0A0C4DH42 116 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 THAP8Q8NA92 274 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 MYOZ3Q8TDC0 251 aa9.24□□□□□ -0.93
SMPD4-209ENST00000439886 F5H768 121 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 CRIP1P50238 77 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 SRSF9Q13242 221 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMPD4-209ENST00000439886 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 LAMA5O15230 3695 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 PSMB2P49721 201 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 RPEQ96AT9 228 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 IGHV3-49A0A0A0MS15 119 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 A0A1W2PNU3 283 aaPredicted RBP9.23□□□□□ -0.93
SMPD4-209ENST00000439886 ZNF833PQ6ZTB9 187 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 C1orf210Q8IVY1 113 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 SLC25A15Q9Y619 301 aa9.23□□□□□ -0.93
SMPD4-209ENST00000439886 ARHGAP32A7KAX9 2087 aa9.22□□□□□ -0.93
SMPD4-209ENST00000439886 RPL7P18124 248 aaKnown RBP9.22□□□□□ -0.93
SMPD4-209ENST00000439886 HLA-DMBP28068 263 aa9.22□□□□□ -0.93
SMPD4-209ENST00000439886 DEFB109BQ30KR1 87 aa9.22□□□□□ -0.93
SMPD4-209ENST00000439886 ASCL5Q7RTU5 278 aa9.22□□□□□ -0.93
SMPD4-209ENST00000439886 TM4SF5O14894 197 aa9.22□□□□□ -0.93
SMPD4-209ENST00000439886 FCN3O75636 299 aa9.22□□□□□ -0.93
SMPD4-209ENST00000439886 DPM2O94777 84 aa9.22□□□□□ -0.93
SMPD4-209ENST00000439886 SRSF2Q01130 221 aaKnown RBP9.22□□□□□ -0.93
SMPD4-209ENST00000439886 TRBV19A0A075B6N1 114 aa9.21□□□□□ -0.93
SMPD4-209ENST00000439886 TRAV26-2A0A0B4J265 109 aa9.21□□□□□ -0.93
SMPD4-209ENST00000439886 NCBP2LA6PVI3 153 aaKnown RBP9.21□□□□□ -0.93
SMPD4-209ENST00000439886 ZNF785A8K8V0 405 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms