RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CXorf65A6NEN9 183 aa8.51□□□□□ -1.05
HSPG2-206ENST00000439717 UMAD1C9J7I0 102 aa8.51□□□□□ -1.05
HSPG2-206ENST00000439717 IGKV2D-40P01614 121 aaPredicted RBP8.51□□□□□ -1.05
HSPG2-206ENST00000439717 NMBP08949 121 aa8.51□□□□□ -1.05
HSPG2-206ENST00000439717 TPT1P13693 172 aaKnown RBP8.51□□□□□ -1.05
HSPG2-206ENST00000439717 RRN3P1Q2M238 152 aa8.51□□□□□ -1.05
HSPG2-206ENST00000439717 TMEM78Q5T7P6 136 aa8.51□□□□□ -1.05
HSPG2-206ENST00000439717 CMTM2Q8TAZ6 248 aa8.51□□□□□ -1.05
HSPG2-206ENST00000439717 FAM19A4Q96LR4 140 aa8.51□□□□□ -1.05
HSPG2-206ENST00000439717 DIRC3C9JPN6 131 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 H7BYZ3 331 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 ZNF138P52744 262 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 TAS2R60P59551 318 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 ZNF726P1Q15940 193 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 LGALSLQ3ZCW2 172 aaPredicted RBP8.5□□□□□ -1.05
HSPG2-206ENST00000439717 GFI1BQ5VTD9 330 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 SSX7Q7RTT5 188 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 STOML3Q8TAV4 291 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 LINC01587Q99440 93 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 VGLL1Q99990 258 aa8.5□□□□□ -1.05
HSPG2-206ENST00000439717 TEX48A0A1B0GUV7 120 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 LOC102723971A0A1B0GUV8 181 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 NUPR2A6NF83 97 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 KLLNB2CW77 178 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 SPART-AS1P0CW21 52 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 CRISP2P16562 243 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 NANOS2P60321 138 aaKnown RBP8.49□□□□□ -1.05
HSPG2-206ENST00000439717 PMS2P11Q13670 270 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 DPPA3Q6W0C5 159 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 TMED6Q8WW62 240 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 ZNF492Q9P255 531 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 LENEPQ9Y5L5 61 aa8.49□□□□□ -1.05
HSPG2-206ENST00000439717 SERTM2A0A1B0GWG4 89 aa8.48□□□□□ -1.05
HSPG2-206ENST00000439717 A0A1W2PRE2 83 aa8.48□□□□□ -1.05
HSPG2-206ENST00000439717 ZNF705GA8MUZ8 300 aaPredicted RBP8.48□□□□□ -1.05
HSPG2-206ENST00000439717 KIR3DS1Q14943 382 aa8.48□□□□□ -1.05
HSPG2-206ENST00000439717 EIF5AL1Q6IS14 154 aaKnown RBP8.48□□□□□ -1.05
HSPG2-206ENST00000439717 CEMP1Q6PRD7 247 aaPredicted RBP8.48□□□□□ -1.05
HSPG2-206ENST00000439717 IQCF2Q8IXL9 164 aa8.48□□□□□ -1.05
HSPG2-206ENST00000439717 C5orf17Q8NAS9 161 aa8.48□□□□□ -1.05
HSPG2-206ENST00000439717 PHLDA1Q8WV24 401 aaPredicted RBP8.48□□□□□ -1.05
HSPG2-206ENST00000439717 NIPSNAP3BQ9BS92 247 aa8.48□□□□□ -1.05
HSPG2-206ENST00000439717 TRAV12-3A0A0B4J271 114 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 C7orf71A4D174 169 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 MAP1LC3B2A6NCE7 125 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 C11orf94C9JXX5 98 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 GPX1P07203 203 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 EMP1P54849 157 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 ZNF493Q6ZR52 646 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 ZFAND2AQ8N6M9 145 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 PYGO2Q9BRQ0 406 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 NKX6-2Q9C056 277 aaPredicted RBP8.47□□□□□ -1.05
HSPG2-206ENST00000439717 MAP1LC3BQ9GZQ8 125 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 PLA2G2EQ9NZK7 142 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 DKK2Q9UBU2 259 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 CELA1Q9UNI1 258 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 KLK5Q9Y337 293 aaPredicted RBP8.47□□□□□ -1.05
HSPG2-206ENST00000439717 STARD9Q9P2P6 4700 aa8.47□□□□□ -1.05
HSPG2-206ENST00000439717 A0A1B0GVG6 124 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 GGTLC3B5MD39 225 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 J3KRW8 73 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 K7EQM0 130 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 FHITP49789 147 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 RAB5CP51148 216 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 FGF8P55075 233 aaPredicted RBP8.46□□□□□ -1.06
HSPG2-206ENST00000439717 SUMO1P63165 101 aaKnown RBP8.46□□□□□ -1.06
HSPG2-206ENST00000439717 C12orf74Q32Q52 190 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 ZFP69Q49AA0 526 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 GOLT1AQ6ZVE7 132 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 SLC51BQ86UW2 128 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 CCDC28AQ8IWP9 274 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 Q8TAT8 98 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 FAM213BQ8TBF2 198 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 TMEM263Q8WUH6 116 aaKnown RBP8.46□□□□□ -1.06
HSPG2-206ENST00000439717 MBD3L1Q8WWY6 194 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 C16orf74Q96GX8 76 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 LINC00467Q9BRT7 94 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 TMPRSS5Q9H3S3 457 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 RPH3ALQ9UNE2 315 aa8.46□□□□□ -1.06
HSPG2-206ENST00000439717 YTHDF2Q9Y5A9 579 aaKnown RBP8.46□□□□□ -1.06
HSPG2-206ENST00000439717 FBLL1A6NHQ2 334 aaKnown RBP8.45□□□□□ -1.06
HSPG2-206ENST00000439717 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 ZNF324O75467 553 aaPredicted RBP8.45□□□□□ -1.06
HSPG2-206ENST00000439717 TCRAP04437 139 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 PRM2P04554 102 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 HTN1P15515 57 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 AZU1P20160 251 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 RNASE4P34096 147 aaKnown RBP8.45□□□□□ -1.06
HSPG2-206ENST00000439717 GNG5P63218 68 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 CD300CQ08708 224 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 BTN1A1Q13410 526 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 FAM222AQ5U5X8 452 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 Q6ZTC4 211 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 C9orf62Q8N4C0 152 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 RNASE8Q8TDE3 154 aaKnown RBP8.45□□□□□ -1.06
HSPG2-206ENST00000439717 EPDR1Q9UM22 224 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 ARL2-SNX15V9GYD0 113 aa8.45□□□□□ -1.06
HSPG2-206ENST00000439717 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
HSPG2-206ENST00000439717 TRAV10A0A0B4J240 114 aa8.44□□□□□ -1.06
HSPG2-206ENST00000439717 PLAC8L1A1L4L8 177 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms