RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 SMIM9A6NGZ8 99 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 ZNF705GA8MUZ8 300 aaPredicted RBP6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 M0R3E3 92 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 MPDU1O75352 247 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 DUSP14O95147 198 aaKnown RBP6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 RLN2P04090 185 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 FAM222AQ5U5X8 452 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 MIR17HGQ75NE6 70 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 RPP25LQ8N5L8 163 aaKnown RBP6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 OR1L4Q8NGR5 311 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 LRRC20Q8TCA0 184 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 PFDN5Q99471 154 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 SLC25A2Q9BXI2 301 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 SMIM3Q9BZL3 60 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 SLC25A31Q9H0C2 315 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 GOLT1BQ9Y3E0 138 aa6.08□□□□□ -1.44
HERPUD2-206ENST00000438224 TRBV19A0A075B6N1 114 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 TRAV10A0A0B4J240 114 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 C5orf52A6NGY3 159 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 IGLL5B9A064 214 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 C11orf94C9JXX5 98 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 VCYO14598 125 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 EIF3GO75821 320 aaKnown RBP eCLIP6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 PTTG1O95997 202 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 INSP01308 110 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 AZU1P20160 251 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 RHOBP62745 196 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 FCN2Q15485 313 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 Q5BKY6 102 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 PQLC2Q6ZP29 291 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 Q6ZSN1 163 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 S100A7AQ86SG5 101 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 ZNF503Q96F45 646 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 ATP5SQ99766 215 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 TMEM14CQ9P0S9 112 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 YTHDF2Q9Y5A9 579 aaKnown RBP6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 MUC4Q99102 2169 aa6.07□□□□□ -1.44
HERPUD2-206ENST00000438224 IGHV4-4A0A075B6R2 117 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 DEFB131BA0A096LNP1 70 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 NPIPB6E9PJ23 425 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 HBE1P02100 147 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 AMBPP02760 352 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 CT45A10P0DMU9 189 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 HIST1H1EP10412 219 aaKnown RBP6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 RPL12P30050 165 aaKnown RBP6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 RRN3P1Q2M238 152 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 GFI1BQ5VTD9 330 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 LGALS9CQ6DKI2 356 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 EXOC3-AS1Q8N2X6 119 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 RNF24Q9Y225 148 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 VPS13DQ5THJ4 4388 aa6.06□□□□□ -1.44
HERPUD2-206ENST00000438224 TMEM189A5PLL7 270 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 ZNF253O75346 499 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 OR10J4P0C629 311 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 SPART-AS1P0CW21 52 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 ERCC8Q13216 396 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 GUK1Q16774 197 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 BLNKQ8WV28 456 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 FXYD5Q96DB9 178 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 PHYHIPLQ96FC7 376 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 NIPSNAP3BQ9BS92 247 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 TMEM208Q9BTX3 173 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 FUT9Q9Y231 359 aa6.05□□□□□ -1.44
HERPUD2-206ENST00000438224 DNAH6Q9C0G6 4158 aa6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 G3V3Q6 166 aa6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 PET100P0DJ07 73 aa6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 TSPOP30536 169 aa6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 CDKN1BP46527 198 aa6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 LINC00310P59036 64 aa6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 ICAM4Q14773 271 aa6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 FFAR4Q5NUL3 377 aa6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 MRPL53Q96EL3 112 aaKnown RBP6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 DAZAP1Q96EP5 407 aaKnown RBP6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 MED28Q9H204 178 aa6.04□□□□□ -1.44
HERPUD2-206ENST00000438224 FRAS1Q86XX4 4008 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 IGKV2-40A0A087WW87 121 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 IGKV2D-40P01614 121 aaPredicted RBP6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 NBEAP1P0C6P0 100 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 HTN3P15516 51 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 TCTAP57738 103 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 RAB2AP61019 212 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 PDE6HQ13956 83 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 OXA1LQ15070 435 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 PRR9Q5T870 116 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 FAM122CQ6P4D5 195 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 Q6ZQT7 251 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 TMEM256Q8N2U0 113 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 OR10J6PQ8NGY7 276 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 RNASE8Q8TDE3 154 aaKnown RBP6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 FAM19A4Q96LR4 140 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 ODF3Q96PU9 254 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 LINC01587Q99440 93 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 VGLL1Q99990 258 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 PAXXQ9BUH6 204 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 MRPL32Q9BYC8 188 aaKnown RBP6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 AGPAT4-IT1Q9H0P7 198 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 OR51M1Q9H341 326 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 KCNIP2Q9NS61 270 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 TIMM9Q9Y5J7 89 aa6.03□□□□□ -1.44
HERPUD2-206ENST00000438224 TRAV12-3A0A0B4J271 114 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms