RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IGHV3-49A0A0A0MS15 119 aa19.68■□□□□ 0.74
CPNE1-216ENST00000437340 PRB4P10163 310 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-216ENST00000437340 SRIP30626 198 aa19.68■□□□□ 0.74
CPNE1-216ENST00000437340 CAMPP49913 170 aa19.68■□□□□ 0.74
CPNE1-216ENST00000437340 LINC00310P59036 64 aa19.68■□□□□ 0.74
CPNE1-216ENST00000437340 PAFAH1B2P68402 229 aa19.68■□□□□ 0.74
CPNE1-216ENST00000437340 NDFIP1Q9BT67 221 aa19.68■□□□□ 0.74
CPNE1-216ENST00000437340 NPFFR1Q9GZQ6 430 aa19.68■□□□□ 0.74
CPNE1-216ENST00000437340 A0A1W2PS18 150 aa19.67■□□□□ 0.74
CPNE1-216ENST00000437340 SERF1AO75920 110 aa19.67■□□□□ 0.74
CPNE1-216ENST00000437340 TRAV8-2A0A0B4J237 113 aa19.67■□□□□ 0.74
CPNE1-216ENST00000437340 HAX1O00165 279 aa19.67■□□□□ 0.74
CPNE1-216ENST00000437340 GZMBP10144 247 aa19.66■□□□□ 0.74
CPNE1-216ENST00000437340 TMEM95Q3KNT9 176 aa19.66■□□□□ 0.74
CPNE1-216ENST00000437340 SH2D1AO60880 128 aa19.65■□□□□ 0.74
CPNE1-216ENST00000437340 BMI1P35226 326 aa19.65■□□□□ 0.74
CPNE1-216ENST00000437340 RNF182Q8N6D2 247 aa19.65■□□□□ 0.74
CPNE1-216ENST00000437340 GSN-AS1Q9NRJ2 163 aa19.65■□□□□ 0.74
CPNE1-216ENST00000437340 PEF1Q9UBV8 284 aaKnown RBP19.65■□□□□ 0.74
CPNE1-216ENST00000437340 LCNL1Q6ZST4 164 aa19.65■□□□□ 0.74
CPNE1-216ENST00000437340 MYO9AB2RTY4 2548 aa19.64■□□□□ 0.74
CPNE1-216ENST00000437340 A0A1B0GUT8 65 aa19.64■□□□□ 0.73
CPNE1-216ENST00000437340 A0A1B0GW15 77 aa19.64■□□□□ 0.73
CPNE1-216ENST00000437340 PRAC2D3DTV9 90 aa19.64■□□□□ 0.73
CPNE1-216ENST00000437340 Q8TAT8 98 aa19.64■□□□□ 0.73
CPNE1-216ENST00000437340 TMEM189A5PLL7 270 aa19.63■□□□□ 0.73
CPNE1-216ENST00000437340 F2Z2F3 143 aa19.63■□□□□ 0.73
CPNE1-216ENST00000437340 SRSF2Q01130 221 aaKnown RBP19.63■□□□□ 0.73
CPNE1-216ENST00000437340 KLF5Q13887 457 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-216ENST00000437340 SSBP4Q9BWG4 385 aaPredicted RBP19.63■□□□□ 0.73
CPNE1-216ENST00000437340 RPS20P60866 119 aaKnown RBP19.62■□□□□ 0.73
CPNE1-216ENST00000437340 KRTAP1-1Q07627 177 aa19.62■□□□□ 0.73
CPNE1-216ENST00000437340 RIGQ13278 110 aa19.62■□□□□ 0.73
CPNE1-216ENST00000437340 TEX29Q8N6K0 151 aa19.62■□□□□ 0.73
CPNE1-216ENST00000437340 C16orf92Q96LL3 132 aa19.62■□□□□ 0.73
CPNE1-216ENST00000437340 K7EMT4 169 aa19.61■□□□□ 0.73
CPNE1-216ENST00000437340 HOXA3O43365 443 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-216ENST00000437340 CDPF1Q6NVV7 123 aa19.61■□□□□ 0.73
CPNE1-216ENST00000437340 C18orf32Q8TCD1 76 aa19.61■□□□□ 0.73
CPNE1-216ENST00000437340 ALKBH7Q9BT30 221 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-216ENST00000437340 DAZ1Q9NQZ3 744 aaKnown RBP19.61■□□□□ 0.73
CPNE1-216ENST00000437340 PPP1R14DQ9NXH3 145 aa19.61■□□□□ 0.73
CPNE1-216ENST00000437340 IGHV7-4-1A0A0J9YVY3 117 aa19.6■□□□□ 0.73
CPNE1-216ENST00000437340 ERCC8Q13216 396 aa19.6■□□□□ 0.73
CPNE1-216ENST00000437340 FAM106AQ4KMX7 169 aa19.6■□□□□ 0.73
CPNE1-216ENST00000437340 GPHB5Q86YW7 130 aa19.6■□□□□ 0.73
CPNE1-216ENST00000437340 GATD1Q8NB37 220 aa19.6■□□□□ 0.73
CPNE1-216ENST00000437340 KCNS1Q96KK3 526 aa19.6■□□□□ 0.73
CPNE1-216ENST00000437340 ZNF702PQ9H963 129 aa19.6■□□□□ 0.73
CPNE1-216ENST00000437340 TLN2Q9Y4G6 2542 aa19.59■□□□□ 0.73
CPNE1-216ENST00000437340 ELANEP08246 267 aa19.59■□□□□ 0.73
CPNE1-216ENST00000437340 C9orf47Q6ZRZ4 202 aa19.59■□□□□ 0.73
CPNE1-216ENST00000437340 BORCS7Q96B45 105 aa19.59■□□□□ 0.73
CPNE1-216ENST00000437340 AGPAT4-IT1Q9H0P7 198 aa19.59■□□□□ 0.73
CPNE1-216ENST00000437340 FABP5P3A8MUU1 101 aa19.58■□□□□ 0.73
CPNE1-216ENST00000437340 ZNF80P51504 273 aaPredicted RBP19.58■□□□□ 0.73
CPNE1-216ENST00000437340 FOXE3Q13461 319 aa19.58■□□□□ 0.73
CPNE1-216ENST00000437340 TMEM78Q5T7P6 136 aa19.58■□□□□ 0.73
CPNE1-216ENST00000437340 NOTCH2Q04721 2471 aa19.58■□□□□ 0.72
CPNE1-216ENST00000437340 ARMS2P0C7Q2 107 aa19.57■□□□□ 0.72
CPNE1-216ENST00000437340 ZNF138P52744 262 aa19.57■□□□□ 0.72
CPNE1-216ENST00000437340 SAMD10Q9BYL1 202 aa19.57■□□□□ 0.72
CPNE1-216ENST00000437340 ACANP16112 2415 aa19.57■□□□□ 0.72
CPNE1-216ENST00000437340 SOCS3O14543 225 aa19.57■□□□□ 0.72
CPNE1-216ENST00000437340 RCHY1Q96PM5 261 aa19.57■□□□□ 0.72
CPNE1-216ENST00000437340 RHPN1-AS1Q9BWJ2 59 aa19.57■□□□□ 0.72
CPNE1-216ENST00000437340 GPX1P07203 203 aa19.56■□□□□ 0.72
CPNE1-216ENST00000437340 SMPXQ9UHP9 88 aa19.56■□□□□ 0.72
CPNE1-216ENST00000437340 CD5LO43866 347 aa19.55■□□□□ 0.72
CPNE1-216ENST00000437340 IQCJQ1A5X6 159 aa19.55■□□□□ 0.72
CPNE1-216ENST00000437340 IL17RELQ6ZVW7 336 aa19.55■□□□□ 0.72
CPNE1-216ENST00000437340 MYOZ3Q8TDC0 251 aa19.55■□□□□ 0.72
CPNE1-216ENST00000437340 NRN1Q9NPD7 142 aa19.55■□□□□ 0.72
CPNE1-216ENST00000437340 UFC1Q9Y3C8 167 aa19.55■□□□□ 0.72
CPNE1-216ENST00000437340 LOC102724200A0A096LPH7 203 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-216ENST00000437340 TM4SF20Q53R12 229 aa19.55■□□□□ 0.72
CPNE1-216ENST00000437340 SIGLECL1Q8N7X8 197 aa19.55■□□□□ 0.72
CPNE1-216ENST00000437340 LENEPQ9Y5L5 61 aa19.55■□□□□ 0.72
CPNE1-216ENST00000437340 C10orf99Q6UWK7 81 aa19.54■□□□□ 0.72
CPNE1-216ENST00000437340 Q8N2B8 174 aa19.54■□□□□ 0.72
CPNE1-216ENST00000437340 RNF152Q8N8N0 203 aa19.54■□□□□ 0.72
CPNE1-216ENST00000437340 RPLP1P05386 114 aaKnown RBP19.53■□□□□ 0.72
CPNE1-216ENST00000437340 LINC01559Q495D7 138 aa19.53■□□□□ 0.72
CPNE1-216ENST00000437340 OTOGQ6ZRI0 2925 aa19.53■□□□□ 0.72
CPNE1-216ENST00000437340 TMSB15BA0A087X1C1 80 aa19.52■□□□□ 0.72
CPNE1-216ENST00000437340 ZNF324O75467 553 aaPredicted RBP19.52■□□□□ 0.72
CPNE1-216ENST00000437340 HIST1H1AQ02539 215 aaPredicted RBP19.52■□□□□ 0.72
CPNE1-216ENST00000437340 LYZL1Q6UWQ5 148 aa19.52■□□□□ 0.72
CPNE1-216ENST00000437340 ZNF493Q6ZR52 646 aa19.52■□□□□ 0.72
CPNE1-216ENST00000437340 TMEM86BQ8N661 226 aa19.52■□□□□ 0.72
CPNE1-216ENST00000437340 ZNF738Q8NE65 137 aa19.52■□□□□ 0.72
CPNE1-216ENST00000437340 OVOL1O14753 267 aa19.52■□□□□ 0.71
CPNE1-216ENST00000437340 CTRLP40313 264 aa19.52■□□□□ 0.71
CPNE1-216ENST00000437340 SAMD13Q5VXD3 122 aa19.52■□□□□ 0.71
CPNE1-216ENST00000437340 Q6ZWC4 215 aa19.52■□□□□ 0.71
CPNE1-216ENST00000437340 C20orf173Q96LM9 149 aa19.52■□□□□ 0.71
CPNE1-216ENST00000437340 TPPP3Q9BW30 176 aa19.52■□□□□ 0.71
CPNE1-216ENST00000437340 MXRA5Q9NR99 2828 aa19.52■□□□□ 0.71
CPNE1-216ENST00000437340 LINC00477Q96M19 166 aa19.51■□□□□ 0.71
CPNE1-216ENST00000437340 LGALS1P09382 135 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms