RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 EBI3Q14213 229 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 AMN1Q8IY45 258 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 MAPKAPK5-AS1Q8N8E1 139 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 FDCSPQ8NFU4 85 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 CALYQ9NYX4 217 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 AMMECR1Q9Y4X0 333 aaPredicted RBP6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 TLN1Q9Y490 2541 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 TPRP12270 2363 aaKnown RBP6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 FREM1Q5H8C1 2179 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 TRGV11A0A075B6L2 103 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 IGHV3OR15-7A0A075B7D8 119 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 OXTP01178 125 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 CD3EP07766 207 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 COX7CP15954 63 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 PRR20EP86478 221 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 PRR20CP86479 221 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 PRR20DP86480 221 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 PRR20BP86481 221 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 PRR20AP86496 221 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 C10orf128Q5T292 105 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 GTSCR1Q86UQ5 136 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 C1orf159Q96HA4 380 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 LINC01600Q96MT4 127 aa6.3□□□□□ -1.4
GAPVD1-209ENST00000436712 BSNQ9UPA5 3926 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 DOCK7Q96N67 2140 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 SPTA1P02549 2419 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 TRBV6-6A0A0A6YYG2 114 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 FAM240AA0A1B0GVK7 77 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 SRRM4A7MD48 611 aaKnown RBP6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 LGALS1P09382 135 aaKnown RBP6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 COL8A2P25067 703 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 FKBP2P26885 142 aaKnown RBP6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 EFNA4P52798 201 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 TMEM155Q4W5P6 130 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 DTX2Q86UW9 622 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 C11orf53Q8IXP5 236 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 FGFBP3Q8TAT2 258 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 PRORYQ9H606 182 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 FOXA2Q9Y261 457 aaPredicted RBP6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 PKIGQ9Y2B9 76 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 ITPR1Q14643 2758 aa6.29□□□□□ -1.4
GAPVD1-209ENST00000436712 M0R135 149 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 LGALS9O00182 355 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 PEX7O00628 323 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 P01737 135 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 MAGEA5P43359 124 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 PLGLB1Q02325 96 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 SPINK9Q5DT21 86 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 NTN5Q8WTR8 489 aaPredicted RBP6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 ZNF799Q96GE5 643 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 AAMDCQ9H7C9 122 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 ZNF492Q9P255 531 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 DPM2O94777 84 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 TRACP01848 142 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 CA6P23280 308 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 B3GALT5-AS1P59052 145 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 SRSF9Q13242 221 aaKnown RBP eCLIP6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 TWIST1Q15672 202 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 LINC01559Q495D7 138 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 FAM27BQ5VT28 67 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 DRAM1Q8N682 238 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 DKK4Q9UBT3 224 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 PYGO1Q9Y3Y4 419 aa6.28□□□□□ -1.4
GAPVD1-209ENST00000436712 ZNF56Q15929 161 aa6.27□□□□□ -1.4
GAPVD1-209ENST00000436712 LINC00336Q6ZUF6 198 aa6.27□□□□□ -1.4
GAPVD1-209ENST00000436712 FAM173AQ9BQD7 235 aa6.27□□□□□ -1.4
GAPVD1-209ENST00000436712 MRPL20Q9BYC9 149 aaKnown RBP6.27□□□□□ -1.4
GAPVD1-209ENST00000436712 CRYGSP22914 178 aa6.27□□□□□ -1.41
GAPVD1-209ENST00000436712 SLC25A48Q6ZT89 311 aaKnown RBP6.27□□□□□ -1.41
GAPVD1-209ENST00000436712 GGNQ86UU5 652 aa6.27□□□□□ -1.41
GAPVD1-209ENST00000436712 TTTY12Q9BZ98 90 aa6.27□□□□□ -1.41
GAPVD1-209ENST00000436712 SIRPDQ9H106 197 aa6.27□□□□□ -1.41
GAPVD1-209ENST00000436712 DEFB127Q9H1M4 99 aa6.27□□□□□ -1.41
GAPVD1-209ENST00000436712 CACNA1AO00555 2505 aa6.27□□□□□ -1.41
GAPVD1-209ENST00000436712 LOC389332A0A1B0GUA5 103 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 A0A1B0GUT8 65 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 NCBP2LA6PVI3 153 aaKnown RBP6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 CXCL13O43927 109 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 HLA-DMBP28068 263 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 CEMP1Q6PRD7 247 aaPredicted RBP6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 C20orf204Q6ZNR8 217 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 C8orf31Q8N9H6 132 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 NABP2Q9BQ15 211 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 MLST8Q9BVC4 326 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 LINC00527Q9UJ94 153 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 SMG1Q96Q15 3661 aaKnown RBP6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 IGHV3-9P01782 118 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 ZNF32P17041 273 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 RIGQ13278 110 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 WDR31Q8NA23 367 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 SPTSSAQ969W0 71 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 METRNQ9UJH8 293 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 U3KQK5 164 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 NBASA2RRP1 2371 aa6.26□□□□□ -1.41
GAPVD1-209ENST00000436712 HSPB6O14558 160 aa6.25□□□□□ -1.41
GAPVD1-209ENST00000436712 FGF12P61328 243 aa6.25□□□□□ -1.41
GAPVD1-209ENST00000436712 LINC00322Q6ZN03 302 aaPredicted RBP6.25□□□□□ -1.41
GAPVD1-209ENST00000436712 ZNF329Q86UD4 541 aa6.25□□□□□ -1.41
GAPVD1-209ENST00000436712 EXOC3-AS1Q8N2X6 119 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms