RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 UBE2DNLQ8IWF7 75 aa12.93□□□□□ -0.34
HMGN1-207ENST00000436324 ZNF503Q96F45 646 aa12.93□□□□□ -0.34
HMGN1-207ENST00000436324 PHYHIPLQ96FC7 376 aa12.93□□□□□ -0.34
HMGN1-207ENST00000436324 LINC00477Q96M19 166 aa12.93□□□□□ -0.34
HMGN1-207ENST00000436324 VGLL1Q99990 258 aa12.93□□□□□ -0.34
HMGN1-207ENST00000436324 RNASE4P34096 147 aaKnown RBP12.92□□□□□ -0.34
HMGN1-207ENST00000436324 RANP62826 216 aaKnown RBP12.92□□□□□ -0.34
HMGN1-207ENST00000436324 C7orf71A4D174 169 aa12.91□□□□□ -0.34
HMGN1-207ENST00000436324 SLC25A5P05141 298 aaKnown RBP12.91□□□□□ -0.34
HMGN1-207ENST00000436324 UBE2L3P68036 154 aaKnown RBP12.91□□□□□ -0.34
HMGN1-207ENST00000436324 CD300CQ08708 224 aa12.91□□□□□ -0.34
HMGN1-207ENST00000436324 BTN1A1Q13410 526 aa12.91□□□□□ -0.34
HMGN1-207ENST00000436324 CBY3A6NI87 242 aa12.9□□□□□ -0.34
HMGN1-207ENST00000436324 M0R2N4 97 aa12.9□□□□□ -0.34
HMGN1-207ENST00000436324 ATP5G1P05496 136 aa12.9□□□□□ -0.34
HMGN1-207ENST00000436324 ATP5G3P48201 142 aa12.9□□□□□ -0.34
HMGN1-207ENST00000436324 TMEM78Q5T7P6 136 aa12.9□□□□□ -0.34
HMGN1-207ENST00000436324 C9orf47Q6ZRZ4 202 aa12.9□□□□□ -0.34
HMGN1-207ENST00000436324 SNURFLB1AK76 121 aa12.89□□□□□ -0.35
HMGN1-207ENST00000436324 GPX1P07203 203 aa12.89□□□□□ -0.35
HMGN1-207ENST00000436324 CSN1S1P47710 185 aa12.89□□□□□ -0.35
HMGN1-207ENST00000436324 TAS2R45P59539 299 aa12.89□□□□□ -0.35
HMGN1-207ENST00000436324 ACOT6Q3I5F7 207 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-207ENST00000436324 KHDC3LQ587J8 217 aa12.89□□□□□ -0.35
HMGN1-207ENST00000436324 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
HMGN1-207ENST00000436324 PYGO2Q9BRQ0 406 aa12.89□□□□□ -0.35
HMGN1-207ENST00000436324 Q9H3A6 140 aa12.89□□□□□ -0.35
HMGN1-207ENST00000436324 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 KLLNB2CW77 178 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 GAGE7O76087 117 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 NUDT3O95989 172 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 RAB2AP61019 212 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 Q5BKY6 102 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 Q8TAT8 98 aa12.88□□□□□ -0.35
HMGN1-207ENST00000436324 BIRC6Q9NR09 4857 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 IGLV2-18A0A075B6J9 118 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 A0A1W2PPV4 95 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
HMGN1-207ENST00000436324 ZNF324O75467 553 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-207ENST00000436324 M6PRP20645 277 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 PRR9Q5T870 116 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 C15orf53Q8NAA6 179 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 HSD17B11Q8NBQ5 300 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 HYLS1Q96M11 299 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 GSN-AS1Q9NRJ2 163 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 ZNF492Q9P255 531 aa12.87□□□□□ -0.35
HMGN1-207ENST00000436324 CRISP2P16562 243 aa12.86□□□□□ -0.35
HMGN1-207ENST00000436324 ZNF138P52744 262 aa12.86□□□□□ -0.35
HMGN1-207ENST00000436324 OR5I1Q13606 314 aa12.86□□□□□ -0.35
HMGN1-207ENST00000436324 Q6ZQT7 251 aa12.86□□□□□ -0.35
HMGN1-207ENST00000436324 ZFAND2AQ8N6M9 145 aa12.86□□□□□ -0.35
HMGN1-207ENST00000436324 OR10G4Q8NGN3 311 aa12.86□□□□□ -0.35
HMGN1-207ENST00000436324 OR10G9Q8NGN4 311 aa12.86□□□□□ -0.35
HMGN1-207ENST00000436324 OR10G7Q8NGN6 311 aa12.86□□□□□ -0.35
HMGN1-207ENST00000436324 RPH3ALQ9UNE2 315 aa12.86□□□□□ -0.35
HMGN1-207ENST00000436324 LYPD1Q8N2G4 141 aa12.85□□□□□ -0.35
HMGN1-207ENST00000436324 EIF4E3Q8N5X7 224 aaKnown RBP12.85□□□□□ -0.35
HMGN1-207ENST00000436324 AQP10Q96PS8 301 aa12.85□□□□□ -0.35
HMGN1-207ENST00000436324 DNAH6Q9C0G6 4158 aa12.85□□□□□ -0.35
HMGN1-207ENST00000436324 DNAH10Q8IVF4 4471 aa12.84□□□□□ -0.35
HMGN1-207ENST00000436324 PGPA6NDG6 321 aa12.84□□□□□ -0.35
HMGN1-207ENST00000436324 RGS13O14921 159 aa12.84□□□□□ -0.35
HMGN1-207ENST00000436324 GIPP09681 153 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-207ENST00000436324 ZNF266Q14584 549 aa12.84□□□□□ -0.35
HMGN1-207ENST00000436324 RNF212Q495C1 297 aa12.84□□□□□ -0.35
HMGN1-207ENST00000436324 Q6ZTI0 123 aa12.84□□□□□ -0.35
HMGN1-207ENST00000436324 LINC00612Q8N6U2 182 aa12.84□□□□□ -0.35
HMGN1-207ENST00000436324 ATG101Q9BSB4 218 aa12.84□□□□□ -0.35
HMGN1-207ENST00000436324 DIRC3C9JPN6 131 aa12.83□□□□□ -0.36
HMGN1-207ENST00000436324 NMBP08949 121 aa12.83□□□□□ -0.36
HMGN1-207ENST00000436324 ZNF680Q8NEM1 530 aa12.83□□□□□ -0.36
HMGN1-207ENST00000436324 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
HMGN1-207ENST00000436324 TP53TG3Q9ULZ0 132 aa12.83□□□□□ -0.36
HMGN1-207ENST00000436324 KLF12Q9Y4X4 402 aa12.83□□□□□ -0.36
HMGN1-207ENST00000436324 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 A0A0J9YY99 117 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 RBAKDNA6NC62 111 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 ATP6V0CP27449 155 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 DAZ2Q13117 558 aaKnown RBP12.82□□□□□ -0.36
HMGN1-207ENST00000436324 RGS21Q2M5E4 152 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 ANXA2RQ3ZCQ2 193 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 PQLC2Q6ZP29 291 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 C11orf72Q8NBR9 251 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 INO80EQ8NBZ0 244 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-207ENST00000436324 CMTM2Q8TAZ6 248 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 RXFP4Q8TDU9 374 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
HMGN1-207ENST00000436324 IGHV1OR15-1A0A075B7D0 117 aa12.81□□□□□ -0.36
HMGN1-207ENST00000436324 TRGV1A0A0A0MS02 117 aa12.81□□□□□ -0.36
HMGN1-207ENST00000436324 HOXA5P20719 270 aa12.81□□□□□ -0.36
HMGN1-207ENST00000436324 CDC34P49427 236 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-207ENST00000436324 TMPRSS5Q9H3S3 457 aa12.81□□□□□ -0.36
HMGN1-207ENST00000436324 TRGV2A0A075B6R0 118 aa12.8□□□□□ -0.36
HMGN1-207ENST00000436324 TRAV26-1A0A087WT03 109 aa12.8□□□□□ -0.36
HMGN1-207ENST00000436324 ARL14EPLP0DKL9 152 aa12.8□□□□□ -0.36
HMGN1-207ENST00000436324 LGALS9BQ3B8N2 356 aa12.8□□□□□ -0.36
HMGN1-207ENST00000436324 FAM74A1Q5RGS3 127 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 284 ms