RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 SGK494Q96LW2 274 aa8.46□□□□□ -1.06
LINC00539-203ENST00000434601 TENM3Q9P273 2699 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 TRAV2A0A0B4J234 112 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 RBAKDNA6NC62 111 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 PRAC2D3DTV9 90 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 SCO1O75880 301 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 LTAP01374 205 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 TFPI2P48307 235 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 DEFB114Q30KQ6 69 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 RBPMS2Q6ZRY4 209 aaKnown RBP8.45□□□□□ -1.06
LINC00539-203ENST00000434601 PRNTQ86SH4 94 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 WFDC3Q8IUB2 231 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 TMEM61Q8N0U2 210 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 LINC00482Q8N8I6 264 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 OCC1Q8TAD7 63 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 ISOC2Q96AB3 205 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 RPS10P5Q9NQ39 176 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 PSG8Q9UQ74 426 aa8.45□□□□□ -1.06
LINC00539-203ENST00000434601 TRAV25A0A0B4J276 109 aa8.44□□□□□ -1.06
LINC00539-203ENST00000434601 K7EN84 100 aa8.44□□□□□ -1.06
LINC00539-203ENST00000434601 TSPAN4O14817 238 aa8.44□□□□□ -1.06
LINC00539-203ENST00000434601 IGLV2-8P01709 118 aa8.44□□□□□ -1.06
LINC00539-203ENST00000434601 MGST1P10620 155 aaKnown RBP8.44□□□□□ -1.06
LINC00539-203ENST00000434601 SNRPD3P62318 126 aaKnown RBP8.44□□□□□ -1.06
LINC00539-203ENST00000434601 CD300EQ496F6 205 aaPredicted RBP8.44□□□□□ -1.06
LINC00539-203ENST00000434601 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
LINC00539-203ENST00000434601 GPR61Q9BZJ8 451 aa8.44□□□□□ -1.06
LINC00539-203ENST00000434601 DNAH3Q8TD57 4116 aa8.44□□□□□ -1.06
LINC00539-203ENST00000434601 A0A087WWC5 75 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 SAP30O75446 220 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 GCGP01275 180 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 ZNF688P0C7X2 276 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 IGLL1P15814 213 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 RNF212Q495C1 297 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 FAM24BQ8N5W8 94 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 Q8TAT8 98 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 SPAG8Q99932 426 aaPredicted RBP8.43□□□□□ -1.06
LINC00539-203ENST00000434601 VGLL1Q99990 258 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 MLST8Q9BVC4 326 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 ZFP30Q9Y2G7 519 aa8.43□□□□□ -1.06
LINC00539-203ENST00000434601 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
LINC00539-203ENST00000434601 OR5I1Q13606 314 aa8.42□□□□□ -1.06
LINC00539-203ENST00000434601 DEFB121Q5J5C9 76 aa8.42□□□□□ -1.06
LINC00539-203ENST00000434601 PSMG4Q5JS54 123 aa8.42□□□□□ -1.06
LINC00539-203ENST00000434601 C9orf47Q6ZRZ4 202 aa8.42□□□□□ -1.06
LINC00539-203ENST00000434601 OR10J6PQ8NGY7 276 aa8.42□□□□□ -1.06
LINC00539-203ENST00000434601 SFRP2Q96HF1 295 aa8.42□□□□□ -1.06
LINC00539-203ENST00000434601 NDFIP1Q9BT67 221 aa8.42□□□□□ -1.06
LINC00539-203ENST00000434601 CTDSP1Q9GZU7 261 aa8.42□□□□□ -1.06
LINC00539-203ENST00000434601 OR4C46A6NHA9 309 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 IGLV1-51P01701 117 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 ZNF138P52744 262 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 ERVFC1-1P60608 527 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 ERCC8Q13216 396 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 SAPCD1Q5SSQ6 148 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 TMEM78Q5T7P6 136 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 PRR27Q6MZM9 219 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 TMEM88Q6PEY1 159 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 OR8A1Q8NGG7 326 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 OR2K2Q8NGT1 345 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 ANAPC16Q96DE5 110 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 PRR25Q96S07 402 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 ASCL2Q99929 193 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 AGPAT4-IT1Q9H0P7 198 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 SMCO4Q9NRQ5 59 aa8.41□□□□□ -1.06
LINC00539-203ENST00000434601 ZMAT5Q9UDW3 170 aaKnown RBP8.41□□□□□ -1.06
LINC00539-203ENST00000434601 IZUMO1RA6ND01 250 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 F6UB75 175 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 H7BYZ3 331 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 K7EIL1 84 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 PPP1R2P9O14990 202 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 DEFB1P60022 68 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 HIST1H1AQ02539 215 aaPredicted RBP8.4□□□□□ -1.06
LINC00539-203ENST00000434601 BTN1A1Q13410 526 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 C15orf54Q8N8G6 183 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 OR10G8Q8NGN5 311 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 C8orf49Q96NF6 230 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 OSTCQ9NRP0 149 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 TMEM242Q9NWH2 141 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 PPP1R14DQ9NXH3 145 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 ZNF492Q9P255 531 aa8.4□□□□□ -1.06
LINC00539-203ENST00000434601 ZNF705DP0CH99 300 aaPredicted RBP8.39□□□□□ -1.07
LINC00539-203ENST00000434601 ZNF705BP0CI00 300 aaPredicted RBP8.39□□□□□ -1.07
LINC00539-203ENST00000434601 CT45A10P0DMU9 189 aa8.39□□□□□ -1.07
LINC00539-203ENST00000434601 EGFEM1PQ0D2K5 195 aa8.39□□□□□ -1.07
LINC00539-203ENST00000434601 IBA57Q5T440 356 aaKnown RBP8.39□□□□□ -1.07
LINC00539-203ENST00000434601 FAM231DQ6ZW35 169 aa8.39□□□□□ -1.07
LINC00539-203ENST00000434601 COX8CQ7Z4L0 72 aa8.39□□□□□ -1.07
LINC00539-203ENST00000434601 ZC2HC1AQ96GY0 325 aa8.39□□□□□ -1.07
LINC00539-203ENST00000434601 LINC00477Q96M19 166 aa8.39□□□□□ -1.07
LINC00539-203ENST00000434601 MCRIP2Q9BUT9 160 aaKnown RBP8.39□□□□□ -1.07
LINC00539-203ENST00000434601 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
LINC00539-203ENST00000434601 MAP6D1Q9H9H5 199 aa8.39□□□□□ -1.07
LINC00539-203ENST00000434601 ZNF256Q9Y2P7 627 aaPredicted RBP8.39□□□□□ -1.07
LINC00539-203ENST00000434601 LENEPQ9Y5L5 61 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms