RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 FHITP49789 147 aa11.25□□□□□ -0.61
TREX1-201ENST00000433541 PMS2P11Q13670 270 aa11.25□□□□□ -0.61
TREX1-201ENST00000433541 SLC51BQ86UW2 128 aa11.25□□□□□ -0.61
TREX1-201ENST00000433541 SFT2D1Q8WV19 159 aa11.25□□□□□ -0.61
TREX1-201ENST00000433541 LINC01587Q99440 93 aa11.25□□□□□ -0.61
TREX1-201ENST00000433541 VGLL1Q99990 258 aa11.25□□□□□ -0.61
TREX1-201ENST00000433541 C11orf68Q9H3H3 251 aaKnown RBP11.25□□□□□ -0.61
TREX1-201ENST00000433541 SMIM9A6NGZ8 99 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 DIRC3C9JPN6 131 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 K7EQM0 130 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 GNG5P63218 68 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 RRN3P1Q2M238 152 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 ZNF705AQ6ZN79 300 aaPredicted RBP11.24□□□□□ -0.61
TREX1-201ENST00000433541 GOLT1AQ6ZVE7 132 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 TMEM256Q8N2U0 113 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 C9orf62Q8N4C0 152 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 Q8NAQ8 132 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 Q8TAT8 98 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 AGPAT4-IT1Q9H0P7 198 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 TMPRSS5Q9H3S3 457 aa11.24□□□□□ -0.61
TREX1-201ENST00000433541 RBAKDNA6NC62 111 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 C3orf84H3BNL1 204 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 CRXO43186 299 aaPredicted RBP11.23□□□□□ -0.61
TREX1-201ENST00000433541 IFNA7P01567 189 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 GPX1P07203 203 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 ZNF138P52744 262 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 NKX2-5P52952 324 aaPredicted RBP11.23□□□□□ -0.61
TREX1-201ENST00000433541 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
TREX1-201ENST00000433541 DPPA3Q6W0C5 159 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 C9orf47Q6ZRZ4 202 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 C11orf45Q8TAV5 145 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 ODF3Q96PU9 254 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 NIPSNAP3BQ9BS92 247 aa11.23□□□□□ -0.61
TREX1-201ENST00000433541 TRAV12-3A0A0B4J271 114 aa11.22□□□□□ -0.61
TREX1-201ENST00000433541 LOC102723971A0A1B0GUV8 181 aa11.22□□□□□ -0.61
TREX1-201ENST00000433541 TMEM189A5PLL7 270 aa11.22□□□□□ -0.61
TREX1-201ENST00000433541 ZNF705GA8MUZ8 300 aaPredicted RBP11.22□□□□□ -0.61
TREX1-201ENST00000433541 H2AFB1P0C5Y9 115 aa11.22□□□□□ -0.61
TREX1-201ENST00000433541 RBMY1A1P0DJD3 496 aaKnown RBP11.22□□□□□ -0.61
TREX1-201ENST00000433541 RBMY1CP0DJD4 496 aa11.22□□□□□ -0.61
TREX1-201ENST00000433541 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
TREX1-201ENST00000433541 RBMY1FQ15415 496 aaKnown RBP11.22□□□□□ -0.61
TREX1-201ENST00000433541 GFI1BQ5VTD9 330 aa11.22□□□□□ -0.61
TREX1-201ENST00000433541 NEU1Q99519 415 aa11.22□□□□□ -0.61
TREX1-201ENST00000433541 C7orf71A4D174 169 aa11.21□□□□□ -0.61
TREX1-201ENST00000433541 KIR3DS1Q14943 382 aa11.21□□□□□ -0.61
TREX1-201ENST00000433541 CST9LP1Q5W188 147 aa11.21□□□□□ -0.61
TREX1-201ENST00000433541 ZNF492Q9P255 531 aa11.21□□□□□ -0.61
TREX1-201ENST00000433541 A0A1W2PRE2 83 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 GGTLC3B5MD39 225 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 H7BYZ3 331 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 RAB5CP51148 216 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
TREX1-201ENST00000433541 BTN1A1Q13410 526 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 CCDC28AQ8IWP9 274 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 SUN5Q8TC36 379 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 C20orf144Q9BQM9 153 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 NDFIP1Q9BT67 221 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 PLA2G2EQ9NZK7 142 aa11.2□□□□□ -0.62
TREX1-201ENST00000433541 YTHDF2Q9Y5A9 579 aaKnown RBP11.2□□□□□ -0.62
TREX1-201ENST00000433541 SERTM2A0A1B0GWG4 89 aa11.19□□□□□ -0.62
TREX1-201ENST00000433541 TCRAP04437 139 aa11.19□□□□□ -0.62
TREX1-201ENST00000433541 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
TREX1-201ENST00000433541 NKX6-2Q9C056 277 aaPredicted RBP11.19□□□□□ -0.62
TREX1-201ENST00000433541 TRAV8-1A0A0A6YYK1 113 aa11.18□□□□□ -0.62
TREX1-201ENST00000433541 PRM2P04554 102 aa11.18□□□□□ -0.62
TREX1-201ENST00000433541 TAS2R60P59551 318 aa11.18□□□□□ -0.62
TREX1-201ENST00000433541 CASC10Q5T4H9 136 aa11.18□□□□□ -0.62
TREX1-201ENST00000433541 ARL6IP6Q8N6S5 226 aa11.18□□□□□ -0.62
TREX1-201ENST00000433541 CYB561D1Q8N8Q1 229 aa11.18□□□□□ -0.62
TREX1-201ENST00000433541 MBD3L1Q8WWY6 194 aa11.18□□□□□ -0.62
TREX1-201ENST00000433541 ATG101Q9BSB4 218 aa11.18□□□□□ -0.62
TREX1-201ENST00000433541 EPDR1Q9UM22 224 aa11.18□□□□□ -0.62
TREX1-201ENST00000433541 FAM74A7A6NL05 159 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 F6UZH7 168 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 RGS13O14921 159 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 PAGE4O60829 102 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 SPART-AS1P0CW21 52 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 CRISP2P16562 243 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 SULT1A2P50226 295 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 PPT1P50897 306 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 ALKAL2Q6UX46 152 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 ZNF767PQ75MW2 155 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 C16orf74Q96GX8 76 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 TREM1Q9NP99 234 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 CELA1Q9UNI1 258 aa11.17□□□□□ -0.62
TREX1-201ENST00000433541 TEX48A0A1B0GUV7 120 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 CBY3A6NI87 242 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 KLLNB2CW77 178 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 PEX7O00628 323 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 NMBP08949 121 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 FAM222AQ5U5X8 452 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 PRNTQ86SH4 94 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 FAM19A4Q96LR4 140 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 PYGO2Q9BRQ0 406 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 LENEPQ9Y5L5 61 aa11.16□□□□□ -0.62
TREX1-201ENST00000433541 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms