RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 AMTNQ6UX39 209 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 C9orf47Q6ZRZ4 202 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 CYB561D1Q8N8Q1 229 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 LINC00477Q96M19 166 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 RARRES2Q99969 163 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 ATG101Q9BSB4 218 aa11.25□□□□□ -0.61
CNOT9-205ENST00000433439 TRAV12-2A0A075B6T6 113 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 KIR2DL5BA0A0G2JN68 375 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 KIR2DL5BA0A0G2JPC4 375 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 LOC102723971A0A1B0GUV8 181 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 RBAKDNA6NC62 111 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 AKR1C3P42330 323 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 ZNF138P52744 262 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 DEFB135Q30KP9 77 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 TOR2AQ5JU69 321 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 CCDC28AQ8IWP9 274 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 KIR2DL5AQ8N109 375 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 ARL6IP6Q8N6S5 226 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 KIR2DL5BQ8NHK3 375 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 LYPD6BQ8NI32 183 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 HIST1H2BAQ96A08 127 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 LINC00479Q96M42 142 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 RETNQ9HD89 108 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 VAX2Q9UIW0 290 aa11.24□□□□□ -0.61
CNOT9-205ENST00000433439 SERTM2A0A1B0GWG4 89 aa11.23□□□□□ -0.61
CNOT9-205ENST00000433439 RBFOX3A6NFN3 312 aa11.23□□□□□ -0.61
CNOT9-205ENST00000433439 A8MTW9 85 aa11.23□□□□□ -0.61
CNOT9-205ENST00000433439 UBE2CO00762 179 aa11.23□□□□□ -0.61
CNOT9-205ENST00000433439 MEF2BQ02080 365 aaPredicted RBP11.23□□□□□ -0.61
CNOT9-205ENST00000433439 PRNTQ86SH4 94 aa11.23□□□□□ -0.61
CNOT9-205ENST00000433439 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
CNOT9-205ENST00000433439 B9D2Q9BPU9 175 aa11.23□□□□□ -0.61
CNOT9-205ENST00000433439 EIF5A2Q9GZV4 153 aaKnown RBP11.23□□□□□ -0.61
CNOT9-205ENST00000433439 ZNF492Q9P255 531 aa11.23□□□□□ -0.61
CNOT9-205ENST00000433439 IGHV3OR16-12A0A075B7B8 117 aa11.22□□□□□ -0.61
CNOT9-205ENST00000433439 GIG44P09565 113 aaPredicted RBP11.22□□□□□ -0.61
CNOT9-205ENST00000433439 TSPOP30536 169 aa11.22□□□□□ -0.61
CNOT9-205ENST00000433439 LEPP41159 167 aa11.22□□□□□ -0.61
CNOT9-205ENST00000433439 UBE2G1P62253 170 aa11.22□□□□□ -0.61
CNOT9-205ENST00000433439 FLI1Q01543 452 aaPredicted RBP11.22□□□□□ -0.61
CNOT9-205ENST00000433439 PMS2P11Q13670 270 aa11.22□□□□□ -0.61
CNOT9-205ENST00000433439 KIR3DS1Q14943 382 aa11.22□□□□□ -0.61
CNOT9-205ENST00000433439 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
CNOT9-205ENST00000433439 PSG8Q9UQ74 426 aa11.22□□□□□ -0.61
CNOT9-205ENST00000433439 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
CNOT9-205ENST00000433439 CDKN1BP46527 198 aa11.21□□□□□ -0.61
CNOT9-205ENST00000433439 RCHY1Q96PM5 261 aa11.21□□□□□ -0.61
CNOT9-205ENST00000433439 TXNDC17Q9BRA2 123 aa11.21□□□□□ -0.61
CNOT9-205ENST00000433439 AMBPP02760 352 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 GPX1P07203 203 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 RNASE4P34096 147 aaKnown RBP11.2□□□□□ -0.62
CNOT9-205ENST00000433439 CEBPGP53567 150 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 ZNF506Q5JVG8 444 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 TMEM75Q8N9X5 138 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 FAM210AQ96ND0 272 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 TCEAL7Q9BRU2 100 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 NDFIP1Q9BT67 221 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 TREM1Q9NP99 234 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 MED9Q9NWA0 146 aa11.2□□□□□ -0.62
CNOT9-205ENST00000433439 TRAV12-3A0A0B4J271 114 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 SPRY2O43597 315 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 PDE6DO43924 150 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 INSP01308 110 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 IGLV2-11P01706 119 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 BTN1A1Q13410 526 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 CLLU1Q5K131 121 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 Q6ZWC4 215 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 IGF2BP2-AS1Q96M15 143 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 C8orf49Q96NF6 230 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 SPATA25Q9BR10 227 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 TMEM208Q9BTX3 173 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 ZMAT4Q9H898 229 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 DNAH3Q8TD57 4116 aa11.19□□□□□ -0.62
CNOT9-205ENST00000433439 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
CNOT9-205ENST00000433439 PRR9Q5T870 116 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 GFI1BQ5VTD9 330 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 Q86TA4 180 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 ZFAND2AQ8N6M9 145 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 C2CD4CQ8TF44 421 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 TVP23CQ96ET8 276 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 FMC1Q96HJ9 113 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 FAM19A4Q96LR4 140 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 GOLT1BQ9Y3E0 138 aa11.18□□□□□ -0.62
CNOT9-205ENST00000433439 C7orf71A4D174 169 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 FBLL1A6NHQ2 334 aaKnown RBP11.17□□□□□ -0.62
CNOT9-205ENST00000433439 CRISP2P16562 243 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 TMEM183BQ1AE95 376 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 ZNF674Q2M3X9 581 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 CSNK1G2-AS1Q8NCQ2 148 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 OR11H2Q8NH07 326 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 C11orf52Q96A22 123 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 RNF183Q96D59 192 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 TM2D3Q9BRN9 247 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 OVOL2Q9BRP0 275 aa11.17□□□□□ -0.62
CNOT9-205ENST00000433439 RAB19A4D1S5 217 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 KLLNB2CW77 178 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms