RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 VGLL1Q99990 258 aa4.15□□□□□ -1.75
HMGB3P24-201ENST00000433260 RPH3ALQ9UNE2 315 aa4.15□□□□□ -1.75
HMGB3P24-201ENST00000433260 COL7A1Q02388 2944 aa4.15□□□□□ -1.75
HMGB3P24-201ENST00000433260 IGKV2-40A0A087WW87 121 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 TRAV12-3A0A0B4J271 114 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 LOC102723971A0A1B0GUV8 181 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 PGPA6NDG6 321 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 SMIM9A6NGZ8 99 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 ZNF253O75346 499 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 INSP01308 110 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 IGKV2D-40P01614 121 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 SPART-AS1P0CW21 52 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 GYPEP15421 78 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 RNASE4P34096 147 aaKnown RBP4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 CDKN1BP46527 198 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 CDC34P49427 236 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 TAS2R45P59539 299 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 UBE2L3P68036 154 aaKnown RBP4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 RNF151Q2KHN1 245 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 RRN3P1Q2M238 152 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 C12orf74Q32Q52 190 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 KHDC3LQ587J8 217 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 RAB24Q969Q5 203 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 NEU1Q99519 415 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 PSMG3Q9BT73 122 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 Q9H3A6 140 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 C11orf68Q9H3H3 251 aaKnown RBP4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 CYTL1Q9NRR1 136 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 CELA1Q9UNI1 258 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 PRELID1Q9Y255 219 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 YTHDF2Q9Y5A9 579 aaKnown RBP4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 DNAH9Q9NYC9 4486 aa4.14□□□□□ -1.75
HMGB3P24-201ENST00000433260 NUPR2A6NF83 97 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 A8MTW9 85 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 IGLL5B9A064 214 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 TAAR5O14804 337 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 JTBO76095 146 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 AMBPP02760 352 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 GPX1P07203 203 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 STAG3L2P0CL84 134 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 STAG3L3P0CL85 134 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 DEFB130BP0DP73 79 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 DEFB130AP0DP74 79 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 HTN3P15516 51 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 TSPOP30536 169 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 LEPP41159 167 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 CSN1S1P47710 185 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 SERF2P84101 59 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 CD300CQ08708 224 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 PDE6HQ13956 83 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 TMEM78Q5T7P6 136 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 FAM222AQ5U5X8 452 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 Q6ZNX1 250 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 Q6ZQT7 251 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 Q6ZTC4 211 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 SSX7Q7RTT5 188 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 CMTM2Q8TAZ6 248 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 GNPNAT1Q96EK6 184 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 SGK494Q96LW2 274 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 LINC00477Q96M19 166 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 ACTR3CQ9C0K3 210 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 TMPRSS5Q9H3S3 457 aa4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 KLK5Q9Y337 293 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P24-201ENST00000433260 DEFB131BA0A096LNP1 70 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 A0A0D9SG52 128 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 DIRC3C9JPN6 131 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 PFDN1O60925 122 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 LY6G6CO95867 125 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 MBP02144 154 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 SLC25A5P05141 298 aaKnown RBP4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 ARL14EPLP0DKL9 152 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 GCHFRP30047 84 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 FGF8P55075 233 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 GNG5P63218 68 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 BTN1A1Q13410 526 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 ODF1Q14990 250 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 FAM74A1Q5RGS3 127 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 AKR1C8PQ5T2L2 129 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 GFI1BQ5VTD9 330 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 PQLC2Q6ZP29 291 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 C9orf47Q6ZRZ4 202 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 TMUB2Q71RG4 321 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 KCNRGQ8N5I3 272 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 Q8TAT8 98 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 RXFP4Q8TDU9 374 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 C2CD4CQ8TF44 421 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 MRPL53Q96EL3 112 aaKnown RBP4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 ST6GAL2Q96JF0 529 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 NIPSNAP3BQ9BS92 247 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 ZNF471Q9BX82 626 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 ZNF492Q9P255 531 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 TENM3Q9P273 2699 aa4.12□□□□□ -1.75
HMGB3P24-201ENST00000433260 TRAV10A0A0B4J240 114 aa4.11□□□□□ -1.75
HMGB3P24-201ENST00000433260 LCE6AA0A183 80 aa4.11□□□□□ -1.75
HMGB3P24-201ENST00000433260 A0A1B0GV50 99 aa4.11□□□□□ -1.75
HMGB3P24-201ENST00000433260 KANTRA0A1W2PQU2 76 aa4.11□□□□□ -1.75
HMGB3P24-201ENST00000433260 C7orf71A4D174 169 aa4.11□□□□□ -1.75
HMGB3P24-201ENST00000433260 TMEM189A5PLL7 270 aa4.11□□□□□ -1.75
HMGB3P24-201ENST00000433260 CBY3A6NI87 242 aa4.11□□□□□ -1.75
HMGB3P24-201ENST00000433260 HMSDA8MTL9 139 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms