RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 A0A087X0K7 114 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 C1orf194Q5T5A4 169 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 TCF24Q7RTU0 167 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 GBGT1Q8N5D6 347 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 Q8TAT8 98 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 DAZAP1Q96EP5 407 aaKnown RBP12.76□□□□□ -0.37
USHBP1-203ENST00000431146 VGLL1Q99990 258 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 RPP21Q9H633 154 aaKnown RBP12.76□□□□□ -0.37
USHBP1-203ENST00000431146 SNURFLB1AK76 121 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 PRAC2D3DTV9 90 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 LCN12Q6JVE5 192 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 NUP35Q8NFH5 326 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 PACRGQ96M98 296 aaPredicted RBP12.76□□□□□ -0.37
USHBP1-203ENST00000431146 NPFFR1Q9GZQ6 430 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 ZNF492Q9P255 531 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 ZNF580Q9UK33 172 aa12.76□□□□□ -0.37
USHBP1-203ENST00000431146 TRBV6-1A0A0K0K1D8 114 aa12.75□□□□□ -0.37
USHBP1-203ENST00000431146 XKRY2A2RUG3 117 aa12.75□□□□□ -0.37
USHBP1-203ENST00000431146 IZUMO1RA6ND01 250 aa12.75□□□□□ -0.37
USHBP1-203ENST00000431146 HIGD1CA8MV81 97 aa12.75□□□□□ -0.37
USHBP1-203ENST00000431146 ZNF253O75346 499 aa12.75□□□□□ -0.37
USHBP1-203ENST00000431146 TSKUQ8WUA8 353 aa12.75□□□□□ -0.37
USHBP1-203ENST00000431146 MRPL18Q9H0U6 180 aaKnown RBP12.75□□□□□ -0.37
USHBP1-203ENST00000431146 ZFP30Q9Y2G7 519 aa12.75□□□□□ -0.37
USHBP1-203ENST00000431146 GZMBP10144 247 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 EDN2P20800 178 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 TM4SF20Q53R12 229 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 GLMPQ8WWB7 406 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
USHBP1-203ENST00000431146 TRAV8-2A0A0B4J237 113 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 A0A1B0GUS0 222 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 CRIP1P50238 77 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 RPL19P84098 196 aaKnown RBP12.74□□□□□ -0.37
USHBP1-203ENST00000431146 ERCC8Q13216 396 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 PRR31Q5SQ13 230 aa12.74□□□□□ -0.37
USHBP1-203ENST00000431146 TCF21O43680 179 aa12.73□□□□□ -0.37
USHBP1-203ENST00000431146 KRTAP1-1Q07627 177 aa12.73□□□□□ -0.37
USHBP1-203ENST00000431146 GTSF1Q8WW33 167 aa12.73□□□□□ -0.37
USHBP1-203ENST00000431146 TMEM190Q8WZ59 177 aa12.73□□□□□ -0.37
USHBP1-203ENST00000431146 NAT8BQ9UHF3 227 aa12.73□□□□□ -0.37
USHBP1-203ENST00000431146 OR2D3Q8NGH3 330 aa12.73□□□□□ -0.37
USHBP1-203ENST00000431146 MTORP42345 2549 aa12.72□□□□□ -0.37
USHBP1-203ENST00000431146 GRIFINA4D1Z8 144 aa12.72□□□□□ -0.37
USHBP1-203ENST00000431146 TMEM136Q6ZRR5 245 aa12.72□□□□□ -0.37
USHBP1-203ENST00000431146 SLC50A1Q9BRV3 221 aa12.72□□□□□ -0.37
USHBP1-203ENST00000431146 ANK3Q12955 4377 aaKnown RBP12.72□□□□□ -0.37
USHBP1-203ENST00000431146 IGKV3-7A0A075B6H7 116 aa12.71□□□□□ -0.37
USHBP1-203ENST00000431146 SERTM2A0A1B0GWG4 89 aa12.71□□□□□ -0.37
USHBP1-203ENST00000431146 NPIPB6E9PJ23 425 aa12.71□□□□□ -0.37
USHBP1-203ENST00000431146 FABP4P15090 132 aa12.71□□□□□ -0.37
USHBP1-203ENST00000431146 KIAA1644Q3SXP7 199 aa12.71□□□□□ -0.37
USHBP1-203ENST00000431146 PGLYRP4Q96LB8 373 aa12.71□□□□□ -0.37
USHBP1-203ENST00000431146 FOXC2Q99958 501 aa12.71□□□□□ -0.37
USHBP1-203ENST00000431146 GNB1LQ9BYB4 327 aa12.71□□□□□ -0.37
USHBP1-203ENST00000431146 A8MWL6 223 aa12.71□□□□□ -0.38
USHBP1-203ENST00000431146 PRR25Q96S07 402 aa12.71□□□□□ -0.38
USHBP1-203ENST00000431146 NOTCH2Q04721 2471 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 RPL11P62913 178 aaKnown RBP12.7□□□□□ -0.38
USHBP1-203ENST00000431146 GPHB5Q86YW7 130 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 C16orf92Q96LL3 132 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 HIST1H2BLQ99880 126 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 YAE1D1Q9NRH1 226 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 CT45A10P0DMU9 189 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 CAMPP49913 170 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 GDF5OSQ5U4N7 250 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 HIST2H2BDQ6DRA6 164 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
USHBP1-203ENST00000431146 DAZ1Q9NQZ3 744 aaKnown RBP12.7□□□□□ -0.38
USHBP1-203ENST00000431146 CT83Q5H943 113 aa12.69□□□□□ -0.38
USHBP1-203ENST00000431146 CSTL1Q9H114 145 aa12.69□□□□□ -0.38
USHBP1-203ENST00000431146 KIR2DL5BA0A0G2JN68 375 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 KIR2DL5BA0A0G2JPC4 375 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 IGHV7-4-1A0A0J9YVY3 117 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 FAM181BA6NEQ2 426 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 ZNF705DP0CH99 300 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-203ENST00000431146 ZNF705BP0CI00 300 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-203ENST00000431146 SRD5A1P18405 259 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 ZNF80P51504 273 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-203ENST00000431146 FOXE3Q13461 319 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 WDR73Q6P4I2 378 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 KIR2DL5AQ8N109 375 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 C20orf173Q96LM9 149 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 SSBP4Q9BWG4 385 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-203ENST00000431146 TMSB15BA0A087X1C1 80 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 TMEM89A2RUT3 159 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 SH2D1AO60880 128 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 SLAQ13239 276 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 FAM106AQ4KMX7 169 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 TMEM256Q8N2U0 113 aa12.68□□□□□ -0.38
USHBP1-203ENST00000431146 A0A1W2PS18 150 aa12.67□□□□□ -0.38
USHBP1-203ENST00000431146 DNAJC9-AS1A6NH13 148 aa12.67□□□□□ -0.38
USHBP1-203ENST00000431146 ELANEP08246 267 aa12.67□□□□□ -0.38
USHBP1-203ENST00000431146 DEFB1P60022 68 aa12.67□□□□□ -0.38
USHBP1-203ENST00000431146 C18orf65Q6ZTR6 163 aa12.67□□□□□ -0.38
USHBP1-203ENST00000431146 OR4B1Q8NGF8 309 aa12.67□□□□□ -0.38
USHBP1-203ENST00000431146 CD5LO43866 347 aa12.67□□□□□ -0.38
USHBP1-203ENST00000431146 MT-ND6P03923 174 aa12.67□□□□□ -0.38
USHBP1-203ENST00000431146 COA6Q5JTJ3 125 aaKnown RBP12.67□□□□□ -0.38
USHBP1-203ENST00000431146 ESM1Q9NQ30 184 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms