RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ZNF705AQ6ZN79 300 aaPredicted RBP9.01□□□□□ -0.97
USP40-205ENST00000430158 ODF3Q96PU9 254 aa9.01□□□□□ -0.97
USP40-205ENST00000430158 VGLL1Q99990 258 aa9.01□□□□□ -0.97
USP40-205ENST00000430158 EDA2RQ9HAV5 297 aa9.01□□□□□ -0.97
USP40-205ENST00000430158 X6R8D5 127 aa9.01□□□□□ -0.97
USP40-205ENST00000430158 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
USP40-205ENST00000430158 A0A1W2PRE2 83 aa9□□□□□ -0.97
USP40-205ENST00000430158 RBAKDNA6NC62 111 aa9□□□□□ -0.97
USP40-205ENST00000430158 M0R2Z0 102 aa9□□□□□ -0.97
USP40-205ENST00000430158 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
USP40-205ENST00000430158 NUTF2P61970 127 aaKnown RBP9□□□□□ -0.97
USP40-205ENST00000430158 KIR3DS1Q14943 382 aa9□□□□□ -0.97
USP40-205ENST00000430158 EIF5AL1Q6IS14 154 aaKnown RBP9□□□□□ -0.97
USP40-205ENST00000430158 C1orf158Q8N1D5 194 aa9□□□□□ -0.97
USP40-205ENST00000430158 OR10J6PQ8NGY7 276 aa9□□□□□ -0.97
USP40-205ENST00000430158 SFT2D1Q8WV19 159 aa9□□□□□ -0.97
USP40-205ENST00000430158 LINC00477Q96M19 166 aa9□□□□□ -0.97
USP40-205ENST00000430158 PPP1R14DQ9NXH3 145 aa9□□□□□ -0.97
USP40-205ENST00000430158 FAM74A7A6NL05 159 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 SLC25A5P05141 298 aaKnown RBP8.99□□□□□ -0.97
USP40-205ENST00000430158 H2AFB1P0C5Y9 115 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 RBMY1A1P0DJD3 496 aaKnown RBP8.99□□□□□ -0.97
USP40-205ENST00000430158 RBMY1CP0DJD4 496 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 CRISP2P16562 243 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 CCL20P78556 96 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 RBMY1FQ15415 496 aaKnown RBP8.99□□□□□ -0.97
USP40-205ENST00000430158 SPINK13Q1W4C9 94 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 FAM74A1Q5RGS3 127 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 CCDC28AQ8IWP9 274 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 IGF2BP2-AS1Q96M15 143 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 C1QTNF4Q9BXJ3 329 aa8.99□□□□□ -0.97
USP40-205ENST00000430158 AMBPP02760 352 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 SUMO1P63165 101 aaKnown RBP8.98□□□□□ -0.97
USP40-205ENST00000430158 GNG5P63218 68 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 ZFAND2AQ8N6M9 145 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 Q8NAQ8 132 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 C5orf17Q8NAS9 161 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 OR11H2Q8NH07 326 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 KRTAP9-9Q9BYP9 154 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 KRTAP9-4Q9BYQ2 154 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 ZNF492Q9P255 531 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 CSMD3Q7Z407 3707 aa8.98□□□□□ -0.97
USP40-205ENST00000430158 TRAV12-2A0A075B6T6 113 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 TRBV7-9A0A0J9YWB2 115 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 KLLNB2CW77 178 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 IGLV2-11P01706 119 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 TCRAP04437 139 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 CDKN1BP46527 198 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 UBE2G2P60604 165 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 PMS2P11Q13670 270 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 ALKAL2Q6UX46 152 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 TVP23CQ96ET8 276 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 NEU1Q99519 415 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 RARRES2Q99969 163 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 EPDR1Q9UM22 224 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 ARL2-SNX15V9GYD0 113 aa8.97□□□□□ -0.97
USP40-205ENST00000430158 NMBP08949 121 aa8.96□□□□□ -0.98
USP40-205ENST00000430158 CSN1S1P47710 185 aa8.96□□□□□ -0.98
USP40-205ENST00000430158 PRR9Q5T870 116 aa8.96□□□□□ -0.98
USP40-205ENST00000430158 GFI1BQ5VTD9 330 aa8.96□□□□□ -0.98
USP40-205ENST00000430158 GOLT1AQ6ZVE7 132 aa8.96□□□□□ -0.98
USP40-205ENST00000430158 IQCF2Q8IXL9 164 aa8.96□□□□□ -0.98
USP40-205ENST00000430158 LYPD6BQ8NI32 183 aa8.96□□□□□ -0.98
USP40-205ENST00000430158 TRAV8-1A0A0A6YYK1 113 aa8.95□□□□□ -0.98
USP40-205ENST00000430158 A0A1B0GV50 99 aa8.95□□□□□ -0.98
USP40-205ENST00000430158 PAGE4O60829 102 aa8.95□□□□□ -0.98
USP40-205ENST00000430158 ZNF324O75467 553 aaPredicted RBP8.95□□□□□ -0.98
USP40-205ENST00000430158 TSPOP30536 169 aa8.95□□□□□ -0.98
USP40-205ENST00000430158 LEPP41159 167 aa8.95□□□□□ -0.98
USP40-205ENST00000430158 ZNF138P52744 262 aa8.95□□□□□ -0.98
USP40-205ENST00000430158 Q8TAT8 98 aa8.95□□□□□ -0.98
USP40-205ENST00000430158 CMTM2Q8TAZ6 248 aa8.95□□□□□ -0.98
USP40-205ENST00000430158 NKX6-2Q9C056 277 aaPredicted RBP8.95□□□□□ -0.98
USP40-205ENST00000430158 C11orf68Q9H3H3 251 aaKnown RBP8.95□□□□□ -0.98
USP40-205ENST00000430158 STARD9Q9P2P6 4700 aa8.95□□□□□ -0.98
USP40-205ENST00000430158 DYNC2H1Q8NCM8 4307 aaKnown RBP8.94□□□□□ -0.98
USP40-205ENST00000430158 IGHV4-28A0A0C4DH34 117 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 SERTM2A0A1B0GWG4 89 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 INSP01308 110 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 PRM2P04554 102 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 ATP5G3P48201 142 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 TMEM78Q5T7P6 136 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 Q6ZQT7 251 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 ATG101Q9BSB4 218 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 KLF12Q9Y4X4 402 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 LENEPQ9Y5L5 61 aa8.94□□□□□ -0.98
USP40-205ENST00000430158 TENM2Q9NT68 2774 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 A0A0J9YWU9 116 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 SMIM9A6NGZ8 99 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 MIFP14174 115 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 CYB561D1Q8N8Q1 229 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 LINC00479Q96M42 142 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 WWC2-AS2Q96NR7 200 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 C20orf144Q9BQM9 153 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 RPH3ALQ9UNE2 315 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 GOLT1BQ9Y3E0 138 aa8.93□□□□□ -0.98
USP40-205ENST00000430158 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
USP40-205ENST00000430158 C7orf71A4D174 169 aa8.92□□□□□ -0.98
USP40-205ENST00000430158 PEX7O00628 323 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms