RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 DUX4L9Q6RFH8 374 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 DPH3Q96FX2 82 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 J3QT63 122 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 OVOL1O14753 267 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 ZFAND5O76080 213 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 PATE4P0C8F1 98 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 P0DMU3 169 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 FAM231AP0DMU4 169 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 FAM231CP0DMU5 169 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 CNTFRP26992 372 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 CCL11P51671 97 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 PCOLCEQ15113 449 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 ZNF56Q15929 161 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 C4orf26Q17RF5 130 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 ZNF672Q499Z4 452 aaPredicted RBP6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 C2orf83Q53S99 150 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 Q5XG85 94 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 SIT1Q9Y3P8 196 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 KNTC1P50748 2209 aa6.96□□□□□ -1.29
CDC42BPA-206ENST00000429440 H3BMM0 161 aa6.96□□□□□ -1.3
CDC42BPA-206ENST00000429440 DEFB121Q5J5C9 76 aa6.96□□□□□ -1.3
CDC42BPA-206ENST00000429440 UBE2WQ96B02 151 aa6.96□□□□□ -1.3
CDC42BPA-206ENST00000429440 PROK2Q9HC23 129 aa6.96□□□□□ -1.3
CDC42BPA-206ENST00000429440 HOXB4P17483 251 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 CD69Q07108 199 aa6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 SRSF9Q13242 221 aaKnown RBP eCLIP6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 HRCT1Q6UXD1 115 aa6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 PATE2Q6UY27 113 aa6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 RTL8AQ9BWD3 113 aa6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 ZDBF2Q9HCK1 2354 aa6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 TEX49A0A1B0GTD5 131 aa6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 K7ENP7 123 aa6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 VKORC1L1Q8N0U8 176 aa6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 SLC25A39Q9BZJ4 359 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 PRO1854Q9UHT4 67 aa6.95□□□□□ -1.3
CDC42BPA-206ENST00000429440 TRAV12-1A0A0B4J245 112 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 TRBV10-2A0A0K0K1G8 114 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 TINCRA0A1B0GVN0 87 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 PROP1O75360 226 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 CRIP2P52943 208 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 TMEM170BQ5T4T1 132 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 MAFAQ8NHW3 353 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 IMMP1LQ96LU5 166 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 FOXB1Q99853 325 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 IGHV1-45A0A0A0MS14 117 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 TRAV17A0A0B4J275 112 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 PATE3B3GLJ2 98 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 MRPS12O15235 138 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 RS1O15537 224 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 SS18L1O75177 396 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 TRACP01848 142 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 ACYP1P07311 99 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 COX6A1P12074 109 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 ATXN8Q156A1 80 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 LINC01620Q4KN68 170 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 S1PR3Q99500 378 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 DEFB126Q9BYW3 111 aa6.94□□□□□ -1.3
CDC42BPA-206ENST00000429440 F8VRH5 84 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 H7C1H1 209 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 NTN3O00634 580 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 IGLV2-11P01706 119 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 CFC1BP0CG36 223 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 CFC1P0CG37 223 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 CCL4P13236 92 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 PRCDQ00LT1 54 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 FAM53AQ6NSI3 398 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 CCL3P10147 92 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 MZT1Q08AG7 82 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 Q71RC1 249 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 LINC00305Q7Z4B0 112 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 Q8N8P6 123 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 C2orf48Q96LS8 159 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 UCN2Q96RP3 112 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 Q9H3A6 140 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 OTORQ9NRC9 128 aa6.93□□□□□ -1.3
CDC42BPA-206ENST00000429440 CDX4O14627 284 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 ZNF134P52741 427 aa6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 IL11RAQ14626 422 aa6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 CEMP1Q6PRD7 247 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 JPT2Q9H910 190 aa6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 LINC00527Q9UJ94 153 aa6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 IGHV3-15A0A0B4J1V0 119 aa6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 SLC25A16P16260 332 aa6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 LYZL1Q6UWQ5 148 aa6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 SCGB1D4Q6XE38 83 aa6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 ZNF256Q9Y2P7 627 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-206ENST00000429440 DOCK10Q96BY6 2186 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 ZNF815PA8K554 130 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 H3BT86 120 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 NDUFA3O95167 84 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 RNASE2P10153 161 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 CXCL5P42830 114 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 SRSF2Q01130 221 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 PRNTQ86SH4 94 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 MDP1Q86V88 176 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 LINC00477Q96M19 166 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 TECTAO75443 2155 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 COX6B1P14854 86 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 LIFP15018 202 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 TMEM75Q8N9X5 138 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms