RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 NMBP08949 121 aa17■□□□□ 0.31
GLI3-202ENST00000428534 ZNF726P1Q15940 193 aa17■□□□□ 0.31
GLI3-202ENST00000428534 MAP1LC3BQ9GZQ8 125 aa17■□□□□ 0.31
GLI3-202ENST00000428534 X6R8D5 127 aa17■□□□□ 0.31
GLI3-202ENST00000428534 IGHV3OR16-12A0A075B7B8 117 aa16.99■□□□□ 0.31
GLI3-202ENST00000428534 A0A1W2PRE2 83 aa16.99■□□□□ 0.31
GLI3-202ENST00000428534 DIRC3C9JPN6 131 aa16.99■□□□□ 0.31
GLI3-202ENST00000428534 CRXO43186 299 aaPredicted RBP16.99■□□□□ 0.31
GLI3-202ENST00000428534 HBE1P02100 147 aa16.99■□□□□ 0.31
GLI3-202ENST00000428534 CT45A10P0DMU9 189 aa16.99■□□□□ 0.31
GLI3-202ENST00000428534 TMED6Q8WW62 240 aa16.99■□□□□ 0.31
GLI3-202ENST00000428534 AGPAT4-IT1Q9H0P7 198 aa16.99■□□□□ 0.31
GLI3-202ENST00000428534 K7EQM0 130 aa16.98■□□□□ 0.31
GLI3-202ENST00000428534 SSX7Q7RTT5 188 aa16.98■□□□□ 0.31
GLI3-202ENST00000428534 C1orf158Q8N1D5 194 aa16.98■□□□□ 0.31
GLI3-202ENST00000428534 Q8NAQ8 132 aa16.98■□□□□ 0.31
GLI3-202ENST00000428534 C5orf17Q8NAS9 161 aa16.98■□□□□ 0.31
GLI3-202ENST00000428534 LENEPQ9Y5L5 61 aa16.98■□□□□ 0.31
GLI3-202ENST00000428534 IGHV4-28A0A0C4DH34 117 aa16.97■□□□□ 0.31
GLI3-202ENST00000428534 ZNF138P52744 262 aa16.97■□□□□ 0.31
GLI3-202ENST00000428534 RRN3P1Q2M238 152 aa16.97■□□□□ 0.31
GLI3-202ENST00000428534 C9orf62Q8N4C0 152 aa16.97■□□□□ 0.31
GLI3-202ENST00000428534 FAM213BQ8TBF2 198 aa16.97■□□□□ 0.31
GLI3-202ENST00000428534 MBD3L1Q8WWY6 194 aa16.97■□□□□ 0.31
GLI3-202ENST00000428534 ZNF492Q9P255 531 aa16.97■□□□□ 0.31
GLI3-202ENST00000428534 TRAV12-2A0A075B6T6 113 aa16.96■□□□□ 0.31
GLI3-202ENST00000428534 IGKV2-40A0A087WW87 121 aaPredicted RBP16.96■□□□□ 0.31
GLI3-202ENST00000428534 TEX46H3BTG2 121 aa16.96■□□□□ 0.31
GLI3-202ENST00000428534 IGKV2D-40P01614 121 aaPredicted RBP16.96■□□□□ 0.31
GLI3-202ENST00000428534 ERCC8Q13216 396 aa16.96■□□□□ 0.31
GLI3-202ENST00000428534 ARL2-SNX15V9GYD0 113 aa16.96■□□□□ 0.31
GLI3-202ENST00000428534 FBLL1A6NHQ2 334 aaKnown RBP16.95■□□□□ 0.3
GLI3-202ENST00000428534 H7BYZ3 331 aa16.95■□□□□ 0.3
GLI3-202ENST00000428534 CRISP2P16562 243 aa16.95■□□□□ 0.3
GLI3-202ENST00000428534 PPT1P50897 306 aa16.95■□□□□ 0.3
GLI3-202ENST00000428534 SUMO1P63165 101 aaKnown RBP16.95■□□□□ 0.3
GLI3-202ENST00000428534 CD300CQ08708 224 aa16.95■□□□□ 0.3
GLI3-202ENST00000428534 SFT2D1Q8WV19 159 aa16.95■□□□□ 0.3
GLI3-202ENST00000428534 LINC01587Q99440 93 aa16.95■□□□□ 0.3
GLI3-202ENST00000428534 NIPSNAP3BQ9BS92 247 aa16.95■□□□□ 0.3
GLI3-202ENST00000428534 TENM2Q9NT68 2774 aa16.95■□□□□ 0.3
GLI3-202ENST00000428534 TEX48A0A1B0GUV7 120 aa16.94■□□□□ 0.3
GLI3-202ENST00000428534 H2AFB1P0C5Y9 115 aa16.94■□□□□ 0.3
GLI3-202ENST00000428534 PRB4P10163 310 aaPredicted RBP16.94■□□□□ 0.3
GLI3-202ENST00000428534 FGF8P55075 233 aaPredicted RBP16.94■□□□□ 0.3
GLI3-202ENST00000428534 TAS2R60P59551 318 aa16.94■□□□□ 0.3
GLI3-202ENST00000428534 C11orf45Q8TAV5 145 aa16.94■□□□□ 0.3
GLI3-202ENST00000428534 FAM19A4Q96LR4 140 aa16.94■□□□□ 0.3
GLI3-202ENST00000428534 VGLL1Q99990 258 aa16.94■□□□□ 0.3
GLI3-202ENST00000428534 GPX1P07203 203 aa16.93■□□□□ 0.3
GLI3-202ENST00000428534 LYSTQ99698 3801 aa16.93■□□□□ 0.3
GLI3-202ENST00000428534 RPH3ALQ9UNE2 315 aa16.93■□□□□ 0.3
GLI3-202ENST00000428534 KLLNB2CW77 178 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 RBMY1A1P0DJD3 496 aaKnown RBP16.92■□□□□ 0.3
GLI3-202ENST00000428534 RBMY1CP0DJD4 496 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 FHITP49789 147 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 SULT1A2P50226 295 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 RBMY1FQ15415 496 aaKnown RBP16.92■□□□□ 0.3
GLI3-202ENST00000428534 GFI1BQ5VTD9 330 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 GOLT1AQ6ZVE7 132 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 TCEAL7Q9BRU2 100 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 TMPRSS5Q9H3S3 457 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 PLA2G2EQ9NZK7 142 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 EPDR1Q9UM22 224 aa16.92■□□□□ 0.3
GLI3-202ENST00000428534 LOC102723971A0A1B0GUV8 181 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 C7orf71A4D174 169 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 CXorf65A6NEN9 183 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 F6UZH7 168 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 DEFB4AO15263 64 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 IFNA7P01567 189 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 TCRAP04437 139 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 ZNF493Q6ZR52 646 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 CCDC28AQ8IWP9 274 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 HIST1H2BAQ96A08 127 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 PYGO2Q9BRQ0 406 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 ATG101Q9BSB4 218 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 NDFIP1Q9BT67 221 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 CSMD3Q7Z407 3707 aa16.9■□□□□ 0.3
GLI3-202ENST00000428534 STARD9Q9P2P6 4700 aa16.89■□□□□ 0.29
GLI3-202ENST00000428534 FAM74A7A6NL05 159 aa16.89■□□□□ 0.29
GLI3-202ENST00000428534 GGTLC3B5MD39 225 aa16.89■□□□□ 0.29
GLI3-202ENST00000428534 CYB561D1Q8N8Q1 229 aa16.89■□□□□ 0.29
GLI3-202ENST00000428534 TRAV1-1A0A0B4J248 108 aa16.88■□□□□ 0.29
GLI3-202ENST00000428534 TRAV12-3A0A0B4J271 114 aa16.88■□□□□ 0.29
GLI3-202ENST00000428534 J3KRW8 73 aa16.88■□□□□ 0.29
GLI3-202ENST00000428534 SPART-AS1P0CW21 52 aa16.88■□□□□ 0.29
GLI3-202ENST00000428534 UBE2G2P60604 165 aa16.88■□□□□ 0.29
GLI3-202ENST00000428534 C16orf74Q96GX8 76 aa16.88■□□□□ 0.29
GLI3-202ENST00000428534 RNASE4P34096 147 aaKnown RBP16.87■□□□□ 0.29
GLI3-202ENST00000428534 GNG5P63218 68 aa16.87■□□□□ 0.29
GLI3-202ENST00000428534 CASC10Q5T4H9 136 aa16.87■□□□□ 0.29
GLI3-202ENST00000428534 ZFAND2AQ8N6M9 145 aa16.87■□□□□ 0.29
GLI3-202ENST00000428534 YTHDF2Q9Y5A9 579 aaKnown RBP16.87■□□□□ 0.29
GLI3-202ENST00000428534 NUPR2A6NF83 97 aa16.86■□□□□ 0.29
GLI3-202ENST00000428534 ZNF705GA8MUZ8 300 aaPredicted RBP16.86■□□□□ 0.29
GLI3-202ENST00000428534 KIR3DS1Q14943 382 aa16.86■□□□□ 0.29
GLI3-202ENST00000428534 CST9LP1Q5W188 147 aa16.86■□□□□ 0.29
GLI3-202ENST00000428534 TMEM75Q8N9X5 138 aa16.86■□□□□ 0.29
GLI3-202ENST00000428534 Q8TAT8 98 aa16.86■□□□□ 0.29
GLI3-202ENST00000428534 LINC00467Q9BRT7 94 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms