RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 FAM72BQ86X60 149 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF431Q8TF32 576 aaPredicted RBP2.18□□□□□ -2.06
RGPD1-203ENST00000428128 TBL1YQ9BQ87 522 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 UPK3BQ9BT76 320 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 SLC25A2Q9BXI2 301 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 C11orf68Q9H3H3 251 aaKnown RBP2.18□□□□□ -2.06
RGPD1-203ENST00000428128 CACNG5Q9UF02 275 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 ZFHX3Q15911 3703 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 IGHV3-43A0A0B4J1X8 118 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 A0A1B0GUV1 79 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 SNRPGP15A8MWD9 76 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 MCRIP1C9JLW8 97 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 IGKV1-39P01597 117 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 IGKV1D-39P04432 117 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 IGLC1P0CG04 106 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 ACVRL1P37023 503 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF660Q6AZW8 331 aaPredicted RBP2.18□□□□□ -2.06
RGPD1-203ENST00000428128 LINC00526Q96FQ7 95 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 ATXN7L3BQ96GX2 97 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 APCP25054 2843 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 NUP214P35658 2090 aaPredicted RBP2.18□□□□□ -2.06
RGPD1-203ENST00000428128 PIKFYVEQ9Y2I7 2098 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 FREM2Q5SZK8 3169 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 TRBV20OR9-2A0A075B6H5 130 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 TRAV9-1A0A075B6T8 112 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 DPRXA6NFQ7 191 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 SOCS3O14543 225 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 PITX3O75364 302 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 LINC00869P0C866 280 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 KLRD1Q13241 179 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 C3orf56Q8N813 242 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 RNASE6Q93091 150 aaKnown RBP2.18□□□□□ -2.06
RGPD1-203ENST00000428128 PYGO2Q9BRQ0 406 aa2.18□□□□□ -2.06
RGPD1-203ENST00000428128 HDHD3Q9BSH5 251 aaPredicted RBP2.18□□□□□ -2.06
RGPD1-203ENST00000428128 SOX21Q9Y651 276 aaPredicted RBP2.18□□□□□ -2.06
RGPD1-203ENST00000428128 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 STAB1Q9NY15 2570 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 BUB1B-PAK6H3BSN5 160 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 SLC25A4P12235 298 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 ELOCQ15369 112 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 RPS27LQ71UM5 84 aaKnown RBP2.17□□□□□ -2.06
RGPD1-203ENST00000428128 EML6Q6ZMW3 1958 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 TRAV1-2A0A0B4J238 106 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 IGHV7-4-1A0A0J9YVY3 117 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 ODAMA1E959 279 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 J3QR89 54 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 COX7A2P2O60397 106 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 ARPP19P56211 112 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 GNB1P62873 340 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 SP6Q3SY56 376 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 UBE2NLQ5JXB2 153 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 FAM74A1Q5RGS3 127 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 C9orf57Q5W0N0 161 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 Q6AWC8 147 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 LCN15Q6UWW0 184 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 PCP2Q8IVA1 136 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 SAXO1Q8IYX7 474 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 KCNRGQ8N5I3 272 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 ZFAND2AQ8N6M9 145 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 MORN4Q8NDC4 146 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 OR5D14Q8NGL3 314 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 FUT9Q9Y231 359 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 SHANK1Q9Y566 2161 aa2.17□□□□□ -2.06
RGPD1-203ENST00000428128 TRAV27A0A087WT01 109 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 TRAV14DV4A0A0A6YYC5 116 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 TRBV27A0A0K0K1C4 114 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF705GA8MUZ8 300 aaPredicted RBP2.16□□□□□ -2.06
RGPD1-203ENST00000428128 BPY2O14599 106 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 MT-ND4LP03901 98 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 AKAIN1P0CW23 69 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 HLA-DRB4P13762 266 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF93P35789 620 aaPredicted RBP2.16□□□□□ -2.06
RGPD1-203ENST00000428128 TPPP2P59282 170 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 RNASE13Q5GAN3 156 aaKnown RBP2.16□□□□□ -2.06
RGPD1-203ENST00000428128 EBLN2Q6P2I7 272 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 CEMP1Q6PRD7 247 aaPredicted RBP2.16□□□□□ -2.06
RGPD1-203ENST00000428128 PATE2Q6UY27 113 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 HLA-DRB4X5D2U9 266 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 CELSR2Q9HCU4 2923 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 MYO7AQ13402 2215 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 IGLV3-16A0A075B6K0 115 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 FAM236AA0A1B0GUQ0 79 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 FAM236BA0A1B0GV22 79 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 LYZL6O75951 148 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF432O94892 652 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 COX7A1P24310 79 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 HIST1H4AP62805 103 aaKnown RBP2.16□□□□□ -2.06
RGPD1-203ENST00000428128 FOXF1Q12946 379 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 MEIG1Q5JSS6 88 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 NTM-AS1Q6ZSK4 140 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 CAMK2N1Q7Z7J9 78 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 DYNAPQ8N1N2 210 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 OTOSQ8NHW6 89 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 STAG3L4Q8TBR4 150 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 SMIM4Q8WVI0 70 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 SEC11CQ9BY50 192 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 TCEAL2Q9H3H9 227 aaPredicted RBP2.16□□□□□ -2.06
RGPD1-203ENST00000428128 XAGE1AQ9HD64 81 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 ZNF581Q9P0T4 197 aa2.16□□□□□ -2.06
RGPD1-203ENST00000428128 NBEAL1Q6ZS30 2694 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms