RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 IFI27P40305 119 aaPredicted RBP11.11□□□□□ -0.63
LIG1-202ENST00000427526 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
LIG1-202ENST00000427526 ZNF575Q86XF7 245 aa11.11□□□□□ -0.63
LIG1-202ENST00000427526 PRR25Q96S07 402 aa11.11□□□□□ -0.63
LIG1-202ENST00000427526 OR2T8A6NH00 312 aa11.11□□□□□ -0.63
LIG1-202ENST00000427526 FA2HQ7L5A8 372 aa11.11□□□□□ -0.63
LIG1-202ENST00000427526 OR10AG1Q8NH19 301 aa11.11□□□□□ -0.63
LIG1-202ENST00000427526 OOSP1A8MZH6 123 aa11.1□□□□□ -0.63
LIG1-202ENST00000427526 D6R8Y8 96 aa11.1□□□□□ -0.63
LIG1-202ENST00000427526 H0Y8G0 127 aa11.1□□□□□ -0.63
LIG1-202ENST00000427526 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
LIG1-202ENST00000427526 TMSB15BA0A087X1C1 80 aa11.1□□□□□ -0.63
LIG1-202ENST00000427526 ERASQ7Z444 233 aa11.1□□□□□ -0.63
LIG1-202ENST00000427526 SIGLEC8Q9NYZ4 499 aa11.1□□□□□ -0.63
LIG1-202ENST00000427526 SVEP1Q4LDE5 3571 aa11.1□□□□□ -0.63
LIG1-202ENST00000427526 IGHV7-81A0A0B4J1V7 117 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 NCR2O95944 276 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 LOXL1Q08397 574 aaPredicted RBP11.09□□□□□ -0.63
LIG1-202ENST00000427526 AMN1Q8IY45 258 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 BPESC1Q9GZL8 116 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 WNK2Q9Y3S1 2297 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 ZNF80P51504 273 aaPredicted RBP11.09□□□□□ -0.63
LIG1-202ENST00000427526 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 BVES-AS1Q5T3Y7 98 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 MINOS1Q5TGZ0 78 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 PSMG3-AS1Q96PY0 264 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 TIMM8BQ9Y5J9 83 aaPredicted RBP11.09□□□□□ -0.63
LIG1-202ENST00000427526 MINOS1-NBL1R4GNA1 71 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 FBLL1A6NHQ2 334 aaKnown RBP11.09□□□□□ -0.63
LIG1-202ENST00000427526 NUDT3O95989 172 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 VGLL1Q99990 258 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 RABAC1Q9UI14 185 aa11.09□□□□□ -0.63
LIG1-202ENST00000427526 FLNCQ14315 2725 aa11.08□□□□□ -0.64
LIG1-202ENST00000427526 PAX8Q06710 450 aa11.08□□□□□ -0.64
LIG1-202ENST00000427526 PRELID3AQ96N28 172 aa11.08□□□□□ -0.64
LIG1-202ENST00000427526 SAP30O75446 220 aa11.08□□□□□ -0.64
LIG1-202ENST00000427526 MRPL51Q4U2R6 128 aaKnown RBP11.08□□□□□ -0.64
LIG1-202ENST00000427526 ORMDL3Q8N138 153 aa11.08□□□□□ -0.64
LIG1-202ENST00000427526 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
LIG1-202ENST00000427526 SMPXQ9UHP9 88 aa11.08□□□□□ -0.64
LIG1-202ENST00000427526 PRB1P04280 392 aa11.07□□□□□ -0.64
LIG1-202ENST00000427526 IGFL4Q6B9Z1 124 aa11.07□□□□□ -0.64
LIG1-202ENST00000427526 Q8N9W7 124 aa11.07□□□□□ -0.64
LIG1-202ENST00000427526 LOC389332A0A1B0GUA5 103 aa11.07□□□□□ -0.64
LIG1-202ENST00000427526 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
LIG1-202ENST00000427526 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
LIG1-202ENST00000427526 Q8TAT8 98 aa11.07□□□□□ -0.64
LIG1-202ENST00000427526 ZFYVE26Q68DK2 2539 aa11.07□□□□□ -0.64
LIG1-202ENST00000427526 MUC21A0A0G2JKD1 596 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 MUC21A0A140T8X8 626 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 COX8AP10176 69 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 LMO4P61968 165 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 MUC21Q5SSG8 566 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 C12orf54Q6X4T0 127 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 TAX1BP3O14907 124 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 IGHV4-39P01824 125 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 KLK9Q2XQG4 91 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 SAMD13Q5VXD3 122 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 SIRPDQ9H106 197 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 KLK9Q9UKQ9 250 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
LIG1-202ENST00000427526 AJUBAQ96IF1 538 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 USP24Q9UPU5 2620 aa11.06□□□□□ -0.64
LIG1-202ENST00000427526 SCGB2A1O75556 95 aa11.05□□□□□ -0.64
LIG1-202ENST00000427526 HIST1H1AQ02539 215 aaPredicted RBP11.05□□□□□ -0.64
LIG1-202ENST00000427526 FER1L6-AS1Q8NA97 138 aa11.05□□□□□ -0.64
LIG1-202ENST00000427526 USP9XQ93008 2570 aaPredicted RBP11.05□□□□□ -0.64
LIG1-202ENST00000427526 FOXE3Q13461 319 aa11.05□□□□□ -0.64
LIG1-202ENST00000427526 C2orf91Q6ZV80 131 aa11.05□□□□□ -0.64
LIG1-202ENST00000427526 ZNF502Q8TBZ5 544 aa11.05□□□□□ -0.64
LIG1-202ENST00000427526 IGHV3OR16-8A0A075B7F1 116 aa11.04□□□□□ -0.64
LIG1-202ENST00000427526 A0A087X0K7 114 aa11.04□□□□□ -0.64
LIG1-202ENST00000427526 DPF1Q92782 380 aa11.04□□□□□ -0.64
LIG1-202ENST00000427526 IGHV3-35A0A0C4DH35 117 aa11.04□□□□□ -0.64
LIG1-202ENST00000427526 TWIST1Q15672 202 aa11.04□□□□□ -0.64
LIG1-202ENST00000427526 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
LIG1-202ENST00000427526 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
LIG1-202ENST00000427526 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 C15orf32Q32M92 178 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 LGALS9BQ3B8N2 356 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 LGALS9CQ6DKI2 356 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 OR8A1Q8NGG7 326 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 FAM110DQ8TAY7 271 aaPredicted RBP11.03□□□□□ -0.64
LIG1-202ENST00000427526 BUB3O43684 328 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 NPYP01303 97 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 GPR183P32249 361 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 BBC3Q96PG8 261 aaPredicted RBP11.03□□□□□ -0.64
LIG1-202ENST00000427526 A0A1B0GV72 72 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 SMKR1H3BMG3 65 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 FGF6P10767 208 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 CKS2P33552 79 aa11.03□□□□□ -0.64
LIG1-202ENST00000427526 DOPEY1Q5JWR5 2465 aa11.02□□□□□ -0.64
LIG1-202ENST00000427526 SPG11Q96JI7 2443 aa11.02□□□□□ -0.64
LIG1-202ENST00000427526 HBDP02042 147 aa11.02□□□□□ -0.65
LIG1-202ENST00000427526 RNF185Q96GF1 192 aa11.02□□□□□ -0.65
LIG1-202ENST00000427526 MSRB1Q9NZV6 116 aa11.02□□□□□ -0.65
LIG1-202ENST00000427526 FABP5P3A8MUU1 101 aa11.02□□□□□ -0.65
LIG1-202ENST00000427526 PRAC2D3DTV9 90 aa11.02□□□□□ -0.65
LIG1-202ENST00000427526 G3V4G9 280 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms