RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 BEX4Q9NWD9 120 aaPredicted RBP10.73□□□□□ -0.69
APOBEC3D-202ENST00000427494 RNF114Q9Y508 228 aa10.73□□□□□ -0.69
APOBEC3D-202ENST00000427494 FBN2P35556 2912 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 A0A0G2JLM5 398 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 A0A1B0GW15 77 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 DDTP30046 118 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 KRTDAPP60985 99 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 CFHR3Q02985 330 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 DEFB113Q30KQ7 82 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 MRPL53Q96EL3 112 aaKnown RBP10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 FAM208BQ5VWN6 2430 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 SMAD7O15105 426 aaKnown RBP10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 Q5PR19 223 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 LYZL1Q6UWQ5 148 aa10.72□□□□□ -0.69
APOBEC3D-202ENST00000427494 CR1P17927 2039 aa10.71□□□□□ -0.69
APOBEC3D-202ENST00000427494 HSBP1O75506 76 aa10.71□□□□□ -0.69
APOBEC3D-202ENST00000427494 RPS20P60866 119 aaKnown RBP10.71□□□□□ -0.69
APOBEC3D-202ENST00000427494 DEFA6Q01524 100 aa10.71□□□□□ -0.69
APOBEC3D-202ENST00000427494 IL17RELQ6ZVW7 336 aa10.71□□□□□ -0.69
APOBEC3D-202ENST00000427494 NIT1Q86X76 327 aa10.71□□□□□ -0.69
APOBEC3D-202ENST00000427494 GATD1Q8NB37 220 aa10.71□□□□□ -0.69
APOBEC3D-202ENST00000427494 C16orf92Q96LL3 132 aa10.71□□□□□ -0.69
APOBEC3D-202ENST00000427494 NPFFR1Q9GZQ6 430 aa10.7□□□□□ -0.7
APOBEC3D-202ENST00000427494 AGPAT4-IT1Q9H0P7 198 aa10.7□□□□□ -0.7
APOBEC3D-202ENST00000427494 MAP1AP78559 2803 aaPredicted RBP10.7□□□□□ -0.7
APOBEC3D-202ENST00000427494 M0R2Z0 102 aa10.7□□□□□ -0.7
APOBEC3D-202ENST00000427494 SSTP61278 116 aa10.7□□□□□ -0.7
APOBEC3D-202ENST00000427494 TMEM78Q5T7P6 136 aa10.7□□□□□ -0.7
APOBEC3D-202ENST00000427494 LRRC75A-AS1Q8N1F1 130 aa10.7□□□□□ -0.7
APOBEC3D-202ENST00000427494 ZNF580Q9UK33 172 aa10.7□□□□□ -0.7
APOBEC3D-202ENST00000427494 FABP5P3A8MUU1 101 aa10.69□□□□□ -0.7
APOBEC3D-202ENST00000427494 M0QZ24 198 aa10.69□□□□□ -0.7
APOBEC3D-202ENST00000427494 ORM1P02763 201 aa10.69□□□□□ -0.7
APOBEC3D-202ENST00000427494 SRSF2Q01130 221 aaKnown RBP10.69□□□□□ -0.7
APOBEC3D-202ENST00000427494 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
APOBEC3D-202ENST00000427494 TEX43Q6ZNM6 134 aa10.69□□□□□ -0.7
APOBEC3D-202ENST00000427494 C9orf139Q6ZV77 190 aa10.69□□□□□ -0.7
APOBEC3D-202ENST00000427494 URB1-AS1Q96HZ7 61 aa10.69□□□□□ -0.7
APOBEC3D-202ENST00000427494 TMEM213A2RRL7 107 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 FSHBP01225 129 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 ZNF138P52744 262 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 FER1L6-AS1Q8NA97 138 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 C20orf173Q96LM9 149 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 CLEC5AQ9NY25 188 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 LRRK2Q5S007 2527 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 C3orf79P0CE67 100 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 MUC21Q5SSG8 566 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 ZNF493Q6ZR52 646 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 ZNF738Q8NE65 137 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 Q96MF0 132 aa10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
APOBEC3D-202ENST00000427494 PSMB8P28062 276 aa10.67□□□□□ -0.7
APOBEC3D-202ENST00000427494 CTRLP40313 264 aa10.67□□□□□ -0.7
APOBEC3D-202ENST00000427494 C9orf47Q6ZRZ4 202 aa10.67□□□□□ -0.7
APOBEC3D-202ENST00000427494 Q8N976 141 aa10.67□□□□□ -0.7
APOBEC3D-202ENST00000427494 VPREB3Q9UKI3 123 aa10.67□□□□□ -0.7
APOBEC3D-202ENST00000427494 KIR2DL5BA0A0G2JN68 375 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 KIR2DL5BA0A0G2JPC4 375 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 IGHV7-4-1A0A0J9YVY3 117 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 FAM181BA6NEQ2 426 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 IGLC6P0CF74 106 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 LINC01559Q495D7 138 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 Q6YL49 198 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 REC114Q7Z4M0 266 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 GPHB5Q86YW7 130 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 KIR2DL5AQ8N109 375 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 CHCHD1Q96BP2 118 aaKnown RBP10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 C14orf144Q96I85 54 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 CSMD2Q7Z408 3487 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 CSPG4Q6UVK1 2322 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 PMCHL1Q16048 86 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 TDRG1Q3Y452 100 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 C10orf99Q6UWK7 81 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 ZNF575Q86XF7 245 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 RHPN1-AS1Q9BWJ2 59 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 DAZ1Q9NQZ3 744 aaKnown RBP10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 POLQO75417 2590 aa10.66□□□□□ -0.7
APOBEC3D-202ENST00000427494 SOCS3O14543 225 aa10.65□□□□□ -0.7
APOBEC3D-202ENST00000427494 LINC00614P0C842 121 aa10.65□□□□□ -0.7
APOBEC3D-202ENST00000427494 HIST1H1AQ02539 215 aaPredicted RBP10.65□□□□□ -0.7
APOBEC3D-202ENST00000427494 TWIST1Q15672 202 aa10.65□□□□□ -0.7
APOBEC3D-202ENST00000427494 VAMP8Q9BV40 100 aa10.65□□□□□ -0.7
APOBEC3D-202ENST00000427494 CSN3P07498 182 aa10.65□□□□□ -0.71
APOBEC3D-202ENST00000427494 FAM106AQ4KMX7 169 aa10.65□□□□□ -0.71
APOBEC3D-202ENST00000427494 PSMG3-AS1Q96PY0 264 aa10.65□□□□□ -0.71
APOBEC3D-202ENST00000427494 IGKV3-7A0A075B6H7 116 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 IGHV1-24A0A0C4DH33 117 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 TMEM89A2RUT3 159 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 CYB5R2Q6BCY4 276 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 AMN1Q8IY45 258 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 NDUFAF3Q9BU61 184 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 PPP1R14DQ9NXH3 145 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 PAM16Q9Y3D7 125 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 SELENOKQ9Y6D0 94 aa10.64□□□□□ -0.71
APOBEC3D-202ENST00000427494 HOXA3O43365 443 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms