RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 PIP4P2Q8N4L2 257 aa5.92□□□□□ -1.46
LINC01108-201ENST00000427276 RNF152Q8N8N0 203 aa5.92□□□□□ -1.46
LINC01108-201ENST00000427276 COL6A6A6NMZ7 2263 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 TRAV40A0A0B4J280 105 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 SPAARA0A1B0GVQ0 90 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 NCBP2LA6PVI3 153 aaKnown RBP5.91□□□□□ -1.46
LINC01108-201ENST00000427276 C17orf100A8MU93 164 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 RBPJQ06330 500 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 ASCL5Q7RTU5 278 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 PGPEP1Q9NXJ5 209 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 ONECUT1Q9UBC0 465 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 SPTBN4Q9H254 2564 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 IGLV3-9A0A075B6K5 115 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.91□□□□□ -1.46
LINC01108-201ENST00000427276 J3QR89 54 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 IGKV1-17P01599 117 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 CTSZQ9UBR2 303 aa5.91□□□□□ -1.46
LINC01108-201ENST00000427276 ZNF785A8K8V0 405 aa5.9□□□□□ -1.46
LINC01108-201ENST00000427276 IGHV1-8P0DP01 117 aa5.9□□□□□ -1.46
LINC01108-201ENST00000427276 EGR2P11161 476 aaPredicted RBP5.9□□□□□ -1.46
LINC01108-201ENST00000427276 ARL3P36405 182 aa5.9□□□□□ -1.46
LINC01108-201ENST00000427276 ID1P41134 155 aa5.9□□□□□ -1.46
LINC01108-201ENST00000427276 GATA4P43694 442 aa5.9□□□□□ -1.46
LINC01108-201ENST00000427276 TMEM158Q8WZ71 300 aa5.9□□□□□ -1.46
LINC01108-201ENST00000427276 TRAV26-2A0A0B4J265 109 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 A0A1B0GWB2 263 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 TMEM8BA6NDV4 472 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 SPRY2O43597 315 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 FCN3O75636 299 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 IGKCP01834 107 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 BSPH1Q075Z2 132 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 ERCC8Q13216 396 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 SIGLEC15Q6ZMC9 328 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 LOC107984156A0A0G2JMH3 177 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 ATP5G2Q06055 141 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 ARL17AQ8IVW1 177 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 VGLL1Q99990 258 aa5.9□□□□□ -1.47
LINC01108-201ENST00000427276 TRBV25-1A0A075B6N4 114 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 IGHV1-3A0A0C4DH29 117 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 GAGE12HA6NDE8 117 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 TMEM178BH3BS89 294 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 LOXP28300 417 aaPredicted RBP5.89□□□□□ -1.47
LINC01108-201ENST00000427276 GRNP28799 593 aaKnown RBP5.89□□□□□ -1.47
LINC01108-201ENST00000427276 NEGR1Q7Z3B1 354 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 DEFB124Q8NES8 71 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 SHANK2-AS3Q9BTD1 123 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 CDX4O14627 284 aaPredicted RBP5.89□□□□□ -1.47
LINC01108-201ENST00000427276 Q6AWC8 147 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 ZNF491Q8N8L2 437 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 MYOZ3Q8TDC0 251 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 ZNF418Q8TF45 676 aaPredicted RBP5.89□□□□□ -1.47
LINC01108-201ENST00000427276 CYSLTR1Q9Y271 337 aa5.89□□□□□ -1.47
LINC01108-201ENST00000427276 TIMM23O14925 209 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 ZNF80P51504 273 aaPredicted RBP5.88□□□□□ -1.47
LINC01108-201ENST00000427276 EFNA4P52798 201 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 MRPL35Q9NZE8 188 aaKnown RBP5.88□□□□□ -1.47
LINC01108-201ENST00000427276 FAM215AQ9Y5M1 114 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 LRBAP50851 2863 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 FTH1P19P0C7X4 201 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 INSL3P51460 131 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 SRSF2Q01130 221 aaKnown RBP5.88□□□□□ -1.47
LINC01108-201ENST00000427276 TMEM30BQ3MIR4 351 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 TEX36Q5VZQ5 186 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 TEX22C9J3V5 150 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 C16orf97H3BN30 126 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 LY6HO94772 140 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 DPM2O94777 84 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 SCGB1D4Q6XE38 83 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 RNF182Q8N6D2 247 aa5.88□□□□□ -1.47
LINC01108-201ENST00000427276 GEMIN7Q9H840 131 aaKnown RBP5.88□□□□□ -1.47
LINC01108-201ENST00000427276 A0A1B0GV72 72 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 MBD3L4A6NDZ8 208 aaPredicted RBP5.87□□□□□ -1.47
LINC01108-201ENST00000427276 MBD3L3A6NE82 208 aaPredicted RBP5.87□□□□□ -1.47
LINC01108-201ENST00000427276 MBD3L5A6NJ08 208 aaPredicted RBP5.87□□□□□ -1.47
LINC01108-201ENST00000427276 H3BVH4 76 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 I3L2K1 104 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 SMIM17P0DL12 118 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 GAGE13Q4V321 117 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 TTC9CQ8N5M4 171 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 MBD3L2Q8NHZ7 208 aaPredicted RBP5.87□□□□□ -1.47
LINC01108-201ENST00000427276 RALYQ9UKM9 306 aaKnown RBP5.87□□□□□ -1.47
LINC01108-201ENST00000427276 SVEP1Q4LDE5 3571 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 H3BRN7 92 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 K7EIM0 57 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 APOMO95445 188 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 CKS1BP61024 79 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 SRSF9Q13242 221 aaKnown RBP eCLIP5.87□□□□□ -1.47
LINC01108-201ENST00000427276 MRGPRG-AS1Q2M3A8 158 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 SPANXN1Q5VSR9 72 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 GFRALQ6UXV0 394 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 MAPKAPK5-AS1Q8N8E1 139 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 PRR25Q96S07 402 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 TMEM14CQ9P0S9 112 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 ANKRD11Q6UB99 2663 aaPredicted RBP5.87□□□□□ -1.47
LINC01108-201ENST00000427276 CREBBPQ92793 2442 aa5.87□□□□□ -1.47
LINC01108-201ENST00000427276 IGKV3-7A0A075B6H7 116 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 INS-IGF2F8WCM5 200 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 RAB9AP51151 201 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 HERV-K104P63124 156 aa5.86□□□□□ -1.47
LINC01108-201ENST00000427276 KLRD1Q13241 179 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms