RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 TMEM219Q86XT9 240 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 SPATA25Q9BR10 227 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 NDPQ00604 133 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 Q6ZVH6 145 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 CREBBPQ92793 2442 aa11.68□□□□□ -0.54
PTPN13-203ENST00000427191 TRAV25A0A0B4J276 109 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 E9PQ18 207 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 IL15RAQ13261 267 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 IGHV1OR15-1A0A075B7D0 117 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 RNF152Q8N8N0 203 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 SDHAF1A6NFY7 115 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 IGHV3-53P01767 116 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 AZU1P20160 251 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 NBL1P41271 181 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 IGKV1-27A0A075B6S5 117 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 LINC01619G3V211 115 aa11.67□□□□□ -0.54
PTPN13-203ENST00000427191 GAGE5Q13069 117 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 GAGE6Q13070 117 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 TEX48A0A1B0GUV7 120 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 UBE2E1P51965 193 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 VWC2Q2TAL6 325 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 NDUFA4O00483 81 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 PSPNO60542 156 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 ZNF134P52741 427 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 MP68P56378 58 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 TMEM105Q8N8V8 129 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 QRFPP83859 136 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 WFDC12Q8WWY7 111 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 MSRB2Q9Y3D2 182 aa11.66□□□□□ -0.54
PTPN13-203ENST00000427191 LINC00473A8K010 186 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 SMKR1H3BMG3 65 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 ATOX1O00244 68 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 ZNF493Q6ZR52 646 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 SMIM2Q9BVW6 85 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 C10orf55Q5SWW7 151 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 PNRC2Q9NPJ4 139 aaKnown RBP11.65□□□□□ -0.54
PTPN13-203ENST00000427191 TRBV19A0A075B6N1 114 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 F6UB75 175 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 PLXNA4Q9HCM2 1894 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 C22orf46C9J442 243 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 IGLC2P0DOY2 106 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 IGLC3P0DOY3 106 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 SH2D6Q7Z4S9 175 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 F5H768 121 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 CHKB-CPT1BH3BT56 60 aa11.65□□□□□ -0.54
PTPN13-203ENST00000427191 MBD3L4A6NDZ8 208 aaPredicted RBP11.65□□□□□ -0.55
PTPN13-203ENST00000427191 MBD3L3A6NE82 208 aaPredicted RBP11.65□□□□□ -0.55
PTPN13-203ENST00000427191 MBD3L5A6NJ08 208 aaPredicted RBP11.65□□□□□ -0.55
PTPN13-203ENST00000427191 MBD3L2Q8NHZ7 208 aaPredicted RBP11.65□□□□□ -0.55
PTPN13-203ENST00000427191 CFHR4Q92496 578 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 PLXNB3Q9ULL4 1909 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 OBSL1O75147 1896 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 J3QLI3 93 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 GATA4P43694 442 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 MORN5Q5VZ52 161 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 J3QQQ9 107 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 SAA4P35542 130 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 WDR90Q96KV7 1748 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 SIPA1L1O43166 1804 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 GAS1P54826 345 aa11.64□□□□□ -0.55
PTPN13-203ENST00000427191 TICRRQ7Z2Z1 1910 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 IGHG2P01859 326 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 PFN2P35080 140 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 TRAV3A0A0B4J244 114 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 PAX9P55771 341 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 SYNJ2BPP57105 145 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 DEFB121Q5J5C9 76 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 SPACA3Q8IXA5 215 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 IGFBPL1Q8WX77 278 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 CFHR2P36980 270 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 LENEPQ9Y5L5 61 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 FRMPD3Q5JV73 1810 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 H3BUA1 57 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 FXYD7P58549 80 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 MRPL51Q4U2R6 128 aaKnown RBP11.63□□□□□ -0.55
PTPN13-203ENST00000427191 TMEM131Q92545 1883 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 RLFQ13129 1914 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 RBAKDNA6NC62 111 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 ETDBQ3ZM63 59 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 USF3Q68DE3 2245 aa11.63□□□□□ -0.55
PTPN13-203ENST00000427191 A0A1W2PPI3 338 aa11.62□□□□□ -0.55
PTPN13-203ENST00000427191 H0YGX0 51 aa11.62□□□□□ -0.55
PTPN13-203ENST00000427191 FLVCR1-AS1Q8TAF5 88 aa11.62□□□□□ -0.55
PTPN13-203ENST00000427191 Q8TCH9 128 aa11.62□□□□□ -0.55
PTPN13-203ENST00000427191 NPYP01303 97 aa11.62□□□□□ -0.55
PTPN13-203ENST00000427191 NDUFS5O43920 106 aa11.62□□□□□ -0.55
PTPN13-203ENST00000427191 UBE2E2Q96LR5 201 aa11.62□□□□□ -0.55
PTPN13-203ENST00000427191 NDUFB1O75438 58 aa11.62□□□□□ -0.55
PTPN13-203ENST00000427191 ZNF833PQ6ZTB9 187 aa11.62□□□□□ -0.55
PTPN13-203ENST00000427191 PRSS29PA6NIE9 313 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 C8orf86Q6ZUL3 223 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 WIPF2Q8TF74 440 aaPredicted RBP11.61□□□□□ -0.55
PTPN13-203ENST00000427191 ATRXP46100 2492 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 DKK1O94907 266 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 IGKV1D-17A0A075B6S4 117 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 OVOL3O00110 214 aa11.61□□□□□ -0.55
PTPN13-203ENST00000427191 PRB4P10163 310 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms