RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 MRPL16Q9NX20 251 aaKnown RBP1.12□□□□□ -2.23
PTPRC-208ENST00000427110 COA4Q9NYJ1 87 aa1.12□□□□□ -2.23
PTPRC-208ENST00000427110 CACFD1Q9UGQ2 172 aa1.12□□□□□ -2.23
PTPRC-208ENST00000427110 NOSIPQ9Y314 301 aaKnown RBP1.12□□□□□ -2.23
PTPRC-208ENST00000427110 URGCP-MRPS24S4R325 110 aa1.12□□□□□ -2.23
PTPRC-208ENST00000427110 CFAP54Q96N23 3096 aa1.12□□□□□ -2.23
PTPRC-208ENST00000427110 OTOGLQ3ZCN5 2332 aa1.12□□□□□ -2.23
PTPRC-208ENST00000427110 FBN1P35555 2871 aaKnown RBP1.12□□□□□ -2.23
PTPRC-208ENST00000427110 DMDP11532 3685 aa1.12□□□□□ -2.23
PTPRC-208ENST00000427110 ZGRF1Q86YA3 2104 aa1.12□□□□□ -2.23
PTPRC-208ENST00000427110 PLCE1Q9P212 2302 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 FRYLO94915 3013 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 COL6A3P12111 3177 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 SVILO95425 2214 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TNCP24821 2201 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TRBV24-1A0A075B6N3 115 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 A0A087WWC5 75 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TRAV1-1A0A0B4J248 108 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 C3orf85A0A1B0GTC6 90 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 IGSF23A1L1A6 192 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM210A6NLX4 147 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 IQCF6A8MYZ5 107 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 ATP6V1G2-DDX39BF2Z307 99 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 F8W036 122 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 H0Y980 276 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TRAPPC2LH3BP13 241 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 ITGB1BP1O14713 200 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 DEGS1O15121 323 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 CRXO43186 299 aaPredicted RBP1.11□□□□□ -2.23
PTPRC-208ENST00000427110 SH2D1AO60880 128 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 PGLYRP1O75594 196 aaPredicted RBP1.11□□□□□ -2.23
PTPRC-208ENST00000427110 OR7C1O76099 320 aaPredicted RBP1.11□□□□□ -2.23
PTPRC-208ENST00000427110 IFNA4P05014 189 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 SCTP09683 121 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 NQO2P16083 231 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 PVALBP20472 110 aaPredicted RBP1.11□□□□□ -2.23
PTPRC-208ENST00000427110 S100GP29377 79 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 OPRM1P35372 400 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 CD200P41217 278 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 HAAOP46952 286 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 RAB13P51153 203 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 HLA-DRB3P79483 266 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 SERF2P84101 59 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 DEFA5Q01523 94 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 PRDX4Q13162 271 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 PEA15Q15121 130 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 PSG3Q16557 428 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 GUK1Q16774 197 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 KHDC3LQ587J8 217 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF818PQ6ZRF7 136 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 SLC25A26Q70HW3 274 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TCF23Q7RTU1 214 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 NIT1Q86X76 327 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 OR5D18Q8NGL1 313 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 OR5L1Q8NGL2 311 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 OR11L1Q8NGX0 322 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 DTD1Q8TEA8 209 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 MBD3L1Q8WWY6 194 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 MAFIPQ8WZ33 124 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 HIST1H2BAQ96A08 127 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 GPR146Q96CH1 333 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 GNPNAT1Q96EK6 184 aaPredicted RBP1.11□□□□□ -2.23
PTPRC-208ENST00000427110 MRAP2Q96G30 205 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 OR8B2Q96RD0 313 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TP53RKQ96S44 253 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 PSMG3Q9BT73 122 aaPredicted RBP1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TTTY12Q9BZ98 90 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 SLC35B3Q9H1N7 401 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 HES4Q9HCC6 221 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM242Q9NWH2 141 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 GSKIPQ9P0R6 139 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TAAR3PQ9P1P4 343 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 PRELID3BQ9Y3B1 194 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TBL2Q9Y4P3 447 aaKnown RBP1.11□□□□□ -2.23
PTPRC-208ENST00000427110 LSM5Q9Y4Y9 91 aaKnown RBP1.11□□□□□ -2.23
PTPRC-208ENST00000427110 PHLDA3Q9Y5J5 127 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 TIMM9Q9Y5J7 89 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 POLEQ07864 2286 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 MUC3AQ02505 3323 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 ARFGEF3Q5TH69 2177 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 BDP1A6H8Y1 2624 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 CADP27708 2225 aa1.11□□□□□ -2.23
PTPRC-208ENST00000427110 FREM2Q5SZK8 3169 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 ICE1Q9Y2F5 2266 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 WDFY4Q6ZS81 3184 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 FRYQ5TBA9 3013 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 IGLV3-9A0A075B6K5 115 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 IGKV1D-37A0A075B6S9 117 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 TRGV5A0A0B4J1U4 118 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 TRAV17A0A0B4J275 112 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 A0A1B0GU33 70 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 C7orf77A4D0Y5 90 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 C5orf49A4QMS7 147 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 FAM24AA6NFZ4 105 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 B4DEV8 164 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 C3orf84H3BNL1 204 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 TGOLN2O43493 480 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 SYNGR1O43759 233 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 YPEL1O60688 119 aa1.1□□□□□ -2.23
PTPRC-208ENST00000427110 TNFSF15O95150 251 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms