RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 TAS2R45P59539 299 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 RNF212Q495C1 297 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 TMEM78Q5T7P6 136 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 FAM122CQ6P4D5 195 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 LYPD1Q8N2G4 141 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 FAM19A4Q96LR4 140 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 MED28Q9H204 178 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 WFDC1Q9HC57 220 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 BIRC6Q9NR09 4857 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 FRAS1Q86XX4 4008 aa7.59□□□□□ -1.19
LINC01238-202ENST00000426962 C7orf71A4D174 169 aa7.58□□□□□ -1.2
LINC01238-202ENST00000426962 SNURFLB1AK76 121 aa7.58□□□□□ -1.2
LINC01238-202ENST00000426962 KLLNB2CW77 178 aa7.58□□□□□ -1.2
LINC01238-202ENST00000426962 ZNF324O75467 553 aaPredicted RBP7.58□□□□□ -1.2
LINC01238-202ENST00000426962 GPX1P07203 203 aa7.58□□□□□ -1.2
LINC01238-202ENST00000426962 RNASE4P34096 147 aaKnown RBP7.58□□□□□ -1.2
LINC01238-202ENST00000426962 CSN1S1P47710 185 aa7.58□□□□□ -1.2
LINC01238-202ENST00000426962 RANP62826 216 aaKnown RBP7.58□□□□□ -1.2
LINC01238-202ENST00000426962 ACOT6Q3I5F7 207 aaPredicted RBP7.58□□□□□ -1.2
LINC01238-202ENST00000426962 KHDC3LQ587J8 217 aa7.58□□□□□ -1.2
LINC01238-202ENST00000426962 UBE2DNLQ8IWF7 75 aa7.58□□□□□ -1.2
LINC01238-202ENST00000426962 ZNF503Q96F45 646 aa7.58□□□□□ -1.2
LINC01238-202ENST00000426962 VGLL1Q99990 258 aa7.58□□□□□ -1.2
LINC01238-202ENST00000426962 IGKV2-40A0A087WW87 121 aaPredicted RBP7.57□□□□□ -1.2
LINC01238-202ENST00000426962 A0A1W2PPV4 95 aa7.57□□□□□ -1.2
LINC01238-202ENST00000426962 IGKV2D-40P01614 121 aaPredicted RBP7.57□□□□□ -1.2
LINC01238-202ENST00000426962 CRISP2P16562 243 aa7.57□□□□□ -1.2
LINC01238-202ENST00000426962 M6PRP20645 277 aa7.57□□□□□ -1.2
LINC01238-202ENST00000426962 CD300CQ08708 224 aa7.57□□□□□ -1.2
LINC01238-202ENST00000426962 DAZ2Q13117 558 aaKnown RBP7.57□□□□□ -1.2
LINC01238-202ENST00000426962 LINC00612Q8N6U2 182 aa7.57□□□□□ -1.2
LINC01238-202ENST00000426962 PHYHIPLQ96FC7 376 aa7.57□□□□□ -1.2
LINC01238-202ENST00000426962 LINC00467Q9BRT7 94 aa7.57□□□□□ -1.2
LINC01238-202ENST00000426962 Q9H3A6 140 aa7.57□□□□□ -1.2
LINC01238-202ENST00000426962 ZNF492Q9P255 531 aa7.57□□□□□ -1.2
LINC01238-202ENST00000426962 TRBV7-9A0A0J9YWB2 115 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 RBAKDNA6NC62 111 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 M0R2N4 97 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 ZNF138P52744 262 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 UBE2L3P68036 154 aaKnown RBP7.56□□□□□ -1.2
LINC01238-202ENST00000426962 BTN1A1Q13410 526 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 ZNF266Q14584 549 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 LGALS9BQ3B8N2 356 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 ANXA2RQ3ZCQ2 193 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 EIF4E3Q8N5X7 224 aaKnown RBP7.56□□□□□ -1.2
LINC01238-202ENST00000426962 RXFP4Q8TDU9 374 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 ASB13Q8WXK3 278 aa7.56□□□□□ -1.2
LINC01238-202ENST00000426962 GAGE12BA1L429 117 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 GAGE7O76087 117 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 NUDT3O95989 172 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 GAGE12FP0CL80 117 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 GAGE12GP0CL81 117 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 GAGE12IP0CL82 117 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 FAM3BP58499 235 aaPredicted RBP7.55□□□□□ -1.2
LINC01238-202ENST00000426962 OR5I1Q13606 314 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 PQLC2Q6ZP29 291 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 LINC00336Q6ZUF6 198 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 ZFAND2AQ8N6M9 145 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 ZNF680Q8NEM1 530 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 OR10G4Q8NGN3 311 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 OR10G9Q8NGN4 311 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 OR10G7Q8NGN6 311 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 AQP10Q96PS8 301 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 ATG101Q9BSB4 218 aa7.55□□□□□ -1.2
LINC01238-202ENST00000426962 PGPA6NDG6 321 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 DIRC3C9JPN6 131 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 RGS13O14921 159 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 EIF3GO75821 320 aaKnown RBP eCLIP7.54□□□□□ -1.2
LINC01238-202ENST00000426962 GIPP09681 153 aaPredicted RBP7.54□□□□□ -1.2
LINC01238-202ENST00000426962 RAB2AP61019 212 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 Q5BKY6 102 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 FAM74A1Q5RGS3 127 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 C11orf72Q8NBR9 251 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 CMTM2Q8TAZ6 248 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 HYLS1Q96M11 299 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 GSN-AS1Q9NRJ2 163 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 LENEPQ9Y5L5 61 aa7.54□□□□□ -1.2
LINC01238-202ENST00000426962 IGLV2-18A0A075B6J9 118 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 IGHV1OR15-1A0A075B7D0 117 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 CCL18P55774 89 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 SERF2P84101 59 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 IBA57Q5T440 356 aaKnown RBP7.53□□□□□ -1.2
LINC01238-202ENST00000426962 PRR9Q5T870 116 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 Q6ZTI0 123 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 ARL6IP6Q8N6S5 226 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 HSD17B11Q8NBQ5 300 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 INO80EQ8NBZ0 244 aaPredicted RBP7.53□□□□□ -1.2
LINC01238-202ENST00000426962 OR2G3Q8NGZ4 309 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 TMED6Q8WW62 240 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 GNPNAT1Q96EK6 184 aaPredicted RBP7.53□□□□□ -1.2
LINC01238-202ENST00000426962 C18orf15Q96N68 181 aa7.53□□□□□ -1.2
LINC01238-202ENST00000426962 PSMG3Q9BT73 122 aaPredicted RBP7.53□□□□□ -1.2
LINC01238-202ENST00000426962 TRGV2A0A075B6R0 118 aa7.52□□□□□ -1.21
LINC01238-202ENST00000426962 TRAV26-1A0A087WT03 109 aa7.52□□□□□ -1.21
LINC01238-202ENST00000426962 HMGB3O15347 200 aaKnown RBP7.52□□□□□ -1.21
LINC01238-202ENST00000426962 SPINK4O60575 86 aa7.52□□□□□ -1.21
LINC01238-202ENST00000426962 MBP02144 154 aa7.52□□□□□ -1.21
LINC01238-202ENST00000426962 HOXA5P20719 270 aa7.52□□□□□ -1.21
LINC01238-202ENST00000426962 ATP6V0CP27449 155 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms