RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 KLF5Q13887 457 aaPredicted RBP13.14□□□□□ -0.31
FN1-208ENST00000426059 OR1N2Q8NGR9 330 aa13.14□□□□□ -0.31
FN1-208ENST00000426059 DPF1Q92782 380 aa13.14□□□□□ -0.31
FN1-208ENST00000426059 GPR61Q9BZJ8 451 aa13.14□□□□□ -0.31
FN1-208ENST00000426059 TFPI2P48307 235 aa13.13□□□□□ -0.31
FN1-208ENST00000426059 PYGO2Q9BRQ0 406 aa13.13□□□□□ -0.31
FN1-208ENST00000426059 SOCS3O14543 225 aa13.13□□□□□ -0.31
FN1-208ENST00000426059 GATCO43716 136 aaKnown RBP13.13□□□□□ -0.31
FN1-208ENST00000426059 TRGC2P03986 189 aa13.13□□□□□ -0.31
FN1-208ENST00000426059 FRMD6-AS1P0C7T7 363 aa13.13□□□□□ -0.31
FN1-208ENST00000426059 CBLN1P23435 193 aa13.13□□□□□ -0.31
FN1-208ENST00000426059 FOXL1Q12952 345 aa13.13□□□□□ -0.31
FN1-208ENST00000426059 REC114Q7Z4M0 266 aa13.13□□□□□ -0.31
FN1-208ENST00000426059 C2CD3Q4AC94 2353 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 SORL1Q92673 2214 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 C2orf70A6NJV1 201 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 A8MWP6 167 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 FOSL1P15407 271 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 CRIP1P50238 77 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 ADAMTSL5Q6ZMM2 481 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 DLX4Q92988 240 aaPredicted RBP13.12□□□□□ -0.31
FN1-208ENST00000426059 SMIM12Q96EX1 92 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 ZFP30Q9Y2G7 519 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 RNF114Q9Y508 228 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 CYSRT1A8MQ03 144 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 LGALS9O00182 355 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 FAM231DQ6ZW35 169 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 JMJD8Q96S16 334 aa13.12□□□□□ -0.31
FN1-208ENST00000426059 TRBV6-1A0A0K0K1D8 114 aa13.11□□□□□ -0.31
FN1-208ENST00000426059 C19orf71A6NCJ1 209 aa13.11□□□□□ -0.31
FN1-208ENST00000426059 ZNF738Q8NE65 137 aa13.11□□□□□ -0.31
FN1-208ENST00000426059 PRR25Q96S07 402 aa13.11□□□□□ -0.31
FN1-208ENST00000426059 IMMP2LQ96T52 175 aa13.11□□□□□ -0.31
FN1-208ENST00000426059 SERTM2A0A1B0GWG4 89 aa13.1□□□□□ -0.31
FN1-208ENST00000426059 RAX2Q96IS3 184 aa13.1□□□□□ -0.31
FN1-208ENST00000426059 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
FN1-208ENST00000426059 F6UB75 175 aa13.1□□□□□ -0.31
FN1-208ENST00000426059 TCF21O43680 179 aa13.1□□□□□ -0.31
FN1-208ENST00000426059 P01737 135 aa13.1□□□□□ -0.31
FN1-208ENST00000426059 RPL19P84098 196 aaKnown RBP13.1□□□□□ -0.31
FN1-208ENST00000426059 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
FN1-208ENST00000426059 GZMBP10144 247 aa13.09□□□□□ -0.31
FN1-208ENST00000426059 ARL6IP6Q8N6S5 226 aa13.09□□□□□ -0.31
FN1-208ENST00000426059 DCANP1Q8TF63 244 aa13.09□□□□□ -0.31
FN1-208ENST00000426059 MS4A6AQ9H2W1 248 aa13.09□□□□□ -0.31
FN1-208ENST00000426059 JMJD1CQ15652 2540 aa13.09□□□□□ -0.31
FN1-208ENST00000426059 CRLF1O75462 422 aa13.08□□□□□ -0.32
FN1-208ENST00000426059 ZNF80P51504 273 aaPredicted RBP13.08□□□□□ -0.32
FN1-208ENST00000426059 RPP21Q9H633 154 aaKnown RBP13.08□□□□□ -0.32
FN1-208ENST00000426059 ZNF492Q9P255 531 aa13.08□□□□□ -0.32
FN1-208ENST00000426059 SMIM27A0A1W2PRY6 76 aa13.08□□□□□ -0.32
FN1-208ENST00000426059 SRD5A3Q9H8P0 318 aa13.08□□□□□ -0.32
FN1-208ENST00000426059 PROK1P58294 105 aa13.07□□□□□ -0.32
FN1-208ENST00000426059 OR9G4Q8NGQ1 327 aa13.07□□□□□ -0.32
FN1-208ENST00000426059 NDUFA7O95182 113 aa13.07□□□□□ -0.32
FN1-208ENST00000426059 OR2D3Q8NGH3 330 aa13.07□□□□□ -0.32
FN1-208ENST00000426059 MRPL53Q96EL3 112 aaKnown RBP13.07□□□□□ -0.32
FN1-208ENST00000426059 NEU1Q99519 415 aa13.07□□□□□ -0.32
FN1-208ENST00000426059 TSSC4Q9Y5U2 329 aaPredicted RBP13.07□□□□□ -0.32
FN1-208ENST00000426059 CT45A10P0DMU9 189 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 SAPCD1Q5SSQ6 148 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 MRPL54Q6P161 138 aaKnown RBP13.06□□□□□ -0.32
FN1-208ENST00000426059 FRZBQ92765 325 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 TEP1Q99973 2627 aaKnown RBP13.06□□□□□ -0.32
FN1-208ENST00000426059 RBAKDNA6NC62 111 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 HIGD1CA8MV81 97 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 CCL24O00175 119 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 ZNF688P0C7X2 276 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 BMI1P35226 326 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 KRTAP10-3P60369 221 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 TMEM78Q5T7P6 136 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 BTF3L4Q96K17 158 aa13.06□□□□□ -0.32
FN1-208ENST00000426059 TMSB15BA0A087X1C1 80 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 J3KRW8 73 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 TYMSP04818 313 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 NSUN5P1Q3KNT7 163 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 NUP35Q8NFH5 326 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 TSKUQ8WUA8 353 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 GTSF1Q8WW33 167 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 SH2D1AO60880 128 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 PRR31Q5SQ13 230 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 Q6ZQT7 251 aa13.05□□□□□ -0.32
FN1-208ENST00000426059 NPIPB6E9PJ23 425 aa13.04□□□□□ -0.32
FN1-208ENST00000426059 PHOX2AO14813 284 aa13.04□□□□□ -0.32
FN1-208ENST00000426059 ZNF138P52744 262 aa13.04□□□□□ -0.32
FN1-208ENST00000426059 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
FN1-208ENST00000426059 C9orf47Q6ZRZ4 202 aa13.04□□□□□ -0.32
FN1-208ENST00000426059 AGRNO00468 2067 aa13.04□□□□□ -0.32
FN1-208ENST00000426059 M0QZ24 198 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 CSN3P07498 182 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 CD33P20138 364 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 CLEC5AQ9NY25 188 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 PEMTQ9UBM1 199 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 HIST1H2BKO60814 126 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 HIST1H2BJP06899 126 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 TRGC1P0CF51 173 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 HIST1H2BOP23527 126 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 HIST1H2BBP33778 126 aa13.03□□□□□ -0.32
FN1-208ENST00000426059 HIST1H2BDP58876 126 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms