RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 FAM222AQ5U5X8 452 aa7.84□□□□□ -1.15
USP49-204ENST00000423567 PQLC2Q6ZP29 291 aa7.84□□□□□ -1.15
USP49-204ENST00000423567 CCDC28AQ8IWP9 274 aa7.84□□□□□ -1.15
USP49-204ENST00000423567 OR2G3Q8NGZ4 309 aa7.84□□□□□ -1.15
USP49-204ENST00000423567 LINC00477Q96M19 166 aa7.84□□□□□ -1.15
USP49-204ENST00000423567 NIPSNAP3BQ9BS92 247 aa7.84□□□□□ -1.15
USP49-204ENST00000423567 TNFSF18Q9UNG2 199 aa7.84□□□□□ -1.15
USP49-204ENST00000423567 TENM2Q9NT68 2774 aa7.84□□□□□ -1.15
USP49-204ENST00000423567 CT45A10P0DMU9 189 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 ATP6V0CP27449 155 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 CDC34P49427 236 aaPredicted RBP7.83□□□□□ -1.16
USP49-204ENST00000423567 DAD1P61803 113 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 SERF2P84101 59 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 FAM74A1Q5RGS3 127 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 GFI1BQ5VTD9 330 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 ZNF493Q6ZR52 646 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 RXFP4Q8TDU9 374 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 GNPNAT1Q96EK6 184 aaPredicted RBP7.83□□□□□ -1.16
USP49-204ENST00000423567 PHYHIPLQ96FC7 376 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 C16orf74Q96GX8 76 aa7.83□□□□□ -1.16
USP49-204ENST00000423567 DYNC2H1Q8NCM8 4307 aaKnown RBP7.83□□□□□ -1.16
USP49-204ENST00000423567 CSMD3Q7Z407 3707 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 TRAV12-3A0A0B4J271 114 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 RNF222A6NCQ9 220 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 LYRM9A8MSI8 78 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 TAAR5O14804 337 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 ARPC5O15511 151 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 SLC25A5P05141 298 aaKnown RBP7.82□□□□□ -1.16
USP49-204ENST00000423567 ERCC8Q13216 396 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 C9orf47Q6ZRZ4 202 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 CMTM2Q8TAZ6 248 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 ZNF503Q96F45 646 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 AGPAT4-IT1Q9H0P7 198 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 Q9H3A6 140 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
USP49-204ENST00000423567 RYR2Q92736 4967 aa7.81□□□□□ -1.16
USP49-204ENST00000423567 PLECQ15149 4684 aaKnown RBP7.81□□□□□ -1.16
USP49-204ENST00000423567 IGHV4-4A0A075B6R2 117 aa7.81□□□□□ -1.16
USP49-204ENST00000423567 IGKV2-40A0A087WW87 121 aaPredicted RBP7.81□□□□□ -1.16
USP49-204ENST00000423567 IGKV2D-40P01614 121 aaPredicted RBP7.81□□□□□ -1.16
USP49-204ENST00000423567 GPX1P07203 203 aa7.81□□□□□ -1.16
USP49-204ENST00000423567 HTN3P15516 51 aa7.81□□□□□ -1.16
USP49-204ENST00000423567 KIR3DS1Q14943 382 aa7.81□□□□□ -1.16
USP49-204ENST00000423567 RPL7L1Q6DKI1 246 aaKnown RBP7.81□□□□□ -1.16
USP49-204ENST00000423567 LGALS9CQ6DKI2 356 aa7.81□□□□□ -1.16
USP49-204ENST00000423567 TMEM263Q8WUH6 116 aaKnown RBP7.81□□□□□ -1.16
USP49-204ENST00000423567 HYLS1Q96M11 299 aa7.81□□□□□ -1.16
USP49-204ENST00000423567 NDUFAF3Q9BU61 184 aa7.81□□□□□ -1.16
USP49-204ENST00000423567 ACTR3CQ9C0K3 210 aaPredicted RBP7.81□□□□□ -1.16
USP49-204ENST00000423567 OTORQ9NRC9 128 aa7.81□□□□□ -1.16
USP49-204ENST00000423567 C7orf71A4D174 169 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 RBAKDNA6NC62 111 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 HMGB3O15347 200 aaKnown RBP7.8□□□□□ -1.16
USP49-204ENST00000423567 EIF3GO75821 320 aaKnown RBP eCLIP7.8□□□□□ -1.16
USP49-204ENST00000423567 PRM2P04554 102 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 NMBP08949 121 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 DEFB130BP0DP73 79 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 DEFB130AP0DP74 79 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 AZU1P20160 251 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 RNASE4P34096 147 aaKnown RBP7.8□□□□□ -1.16
USP49-204ENST00000423567 ZNF138P52744 262 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 RAB24Q969Q5 203 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 VGLL1Q99990 258 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 PYGO2Q9BRQ0 406 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 SH3BGRL3Q9H299 93 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 ZNF492Q9P255 531 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 APLNQ9ULZ1 77 aa7.8□□□□□ -1.16
USP49-204ENST00000423567 TIMM8BQ9Y5J9 83 aaPredicted RBP7.8□□□□□ -1.16
USP49-204ENST00000423567 TRBV7-9A0A0J9YWB2 115 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 PGPA6NDG6 321 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 SNURFLB1AK76 121 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 KLLNB2CW77 178 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 DIRC3C9JPN6 131 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 CXorf1O96002 111 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 STAG3L2P0CL84 134 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 STAG3L3P0CL85 134 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 ARL14EPLP0DKL9 152 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 CRISP2P16562 243 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 AKR1C8PQ5T2L2 129 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 FAM210BQ96KR6 192 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 RPH3ALQ9UNE2 315 aa7.79□□□□□ -1.16
USP49-204ENST00000423567 G3V3Q6 166 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 SMLR1H3BR10 107 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 GCHFRP30047 84 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 BTN1A1Q13410 526 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 IQCF2Q8IXL9 164 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 ARL6IP6Q8N6S5 226 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 ZNF680Q8NEM1 530 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 RNASE8Q8TDE3 154 aaKnown RBP7.78□□□□□ -1.16
USP49-204ENST00000423567 FAM19A4Q96LR4 140 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 ARPC5LQ9BPX5 153 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 NOP10Q9NPE3 64 aaKnown RBP7.78□□□□□ -1.16
USP49-204ENST00000423567 TMEM167BQ9NRX6 74 aa7.78□□□□□ -1.16
USP49-204ENST00000423567 PLAC8L1A1L4L8 177 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 CBY3A6NI87 242 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 K7EQM0 130 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 RGS13O14921 159 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 ATP5G1P05496 136 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 ATP5G3P48201 142 aa7.77□□□□□ -1.17
USP49-204ENST00000423567 CD300CQ08708 224 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms