RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 DLC1Q96QB1 1528 aa0.51□□□□□ -2.33
LINC00397-201ENST00000422074 JPT1Q9UK76 154 aa0.51□□□□□ -2.33
LINC00397-201ENST00000422074 FANCMQ8IYD8 2048 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 KCPQ6ZWJ8 1503 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 A0A0J9YY99 117 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 BBIP1A8MTZ0 92 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 NEFHP12036 1026 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 CCL4P13236 92 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 PDE6GP18545 87 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 S100A11P31949 105 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 MAXP61244 160 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 C10orf111Q8N326 155 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 DIRC1Q969H9 104 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 CARD19Q96LW7 228 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 CCL19Q99731 98 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 PCBD2Q9H0N5 130 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 LPAR5Q9H1C0 372 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 LRTM1Q9HBL6 345 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 IL20Q9NYY1 176 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 ATPIF1Q9UII2 106 aa0.5□□□□□ -2.33
LINC00397-201ENST00000422074 ZFC3H1O60293 1989 aaKnown RBP0.5□□□□□ -2.33
LINC00397-201ENST00000422074 TCOF1Q13428 1488 aaKnown RBP0.49□□□□□ -2.33
LINC00397-201ENST00000422074 MYH3P11055 1940 aa0.49□□□□□ -2.33
LINC00397-201ENST00000422074 A0A0D9SG42 100 aa0.49□□□□□ -2.33
LINC00397-201ENST00000422074 PRORSD1PA6NEY8 169 aa0.49□□□□□ -2.33
LINC00397-201ENST00000422074 ARL5CA6NH57 179 aa0.49□□□□□ -2.33
LINC00397-201ENST00000422074 E7EQ34 232 aa0.49□□□□□ -2.33
LINC00397-201ENST00000422074 FAM107AO95990 144 aa0.49□□□□□ -2.33
LINC00397-201ENST00000422074 C3orf62Q6ZUJ4 267 aa0.49□□□□□ -2.33
LINC00397-201ENST00000422074 RMND5BQ96G75 393 aaPredicted RBP0.49□□□□□ -2.33
LINC00397-201ENST00000422074 CIB3Q96Q77 187 aaPredicted RBP0.49□□□□□ -2.33
LINC00397-201ENST00000422074 V9GYQ6 96 aa0.49□□□□□ -2.33
LINC00397-201ENST00000422074 USP54Q70EL1 1684 aa0.49□□□□□ -2.33
LINC00397-201ENST00000422074 UNC13CQ8NB66 2214 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 LOC107986453A0A1B0GWG9 222 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 SAA1P0DJI8 122 aaPredicted RBP0.48□□□□□ -2.33
LINC00397-201ENST00000422074 RPS3P23396 243 aaKnown RBP eCLIP0.48□□□□□ -2.33
LINC00397-201ENST00000422074 SPINK7P58062 85 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 SNRPD3P62318 126 aaKnown RBP0.48□□□□□ -2.33
LINC00397-201ENST00000422074 LINC00305Q7Z4B0 112 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 TEX29Q8N6K0 151 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.48□□□□□ -2.33
LINC00397-201ENST00000422074 CCL4L1Q8NHW4 92 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 LXNQ9BS40 222 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 TAF9BQ9HBM6 251 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 NUP210Q8TEM1 1887 aaPredicted RBP0.48□□□□□ -2.33
LINC00397-201ENST00000422074 KIAA1549LQ6ZVL6 1849 aa0.48□□□□□ -2.33
LINC00397-201ENST00000422074 LOC107984156A0A0G2JMH3 177 aa0.47□□□□□ -2.33
LINC00397-201ENST00000422074 A0A1B0GV72 72 aa0.47□□□□□ -2.33
LINC00397-201ENST00000422074 H7BYZ3 331 aa0.47□□□□□ -2.33
LINC00397-201ENST00000422074 CAV3P56539 151 aa0.47□□□□□ -2.33
LINC00397-201ENST00000422074 TMEM78Q5T7P6 136 aa0.47□□□□□ -2.33
LINC00397-201ENST00000422074 ARL17AQ8IVW1 177 aa0.47□□□□□ -2.33
LINC00397-201ENST00000422074 PLAC8Q9NZF1 115 aa0.47□□□□□ -2.33
LINC00397-201ENST00000422074 FREM3P0C091 2139 aa0.46□□□□□ -2.34
LINC00397-201ENST00000422074 TET1Q8NFU7 2136 aa0.46□□□□□ -2.34
LINC00397-201ENST00000422074 TRAV13-1A0A0B4J241 112 aa0.46□□□□□ -2.34
LINC00397-201ENST00000422074 SRP9P49458 86 aaKnown RBP0.46□□□□□ -2.34
LINC00397-201ENST00000422074 LSM3P62310 102 aaKnown RBP0.46□□□□□ -2.34
LINC00397-201ENST00000422074 QRFPP83859 136 aa0.46□□□□□ -2.34
LINC00397-201ENST00000422074 TCTEX1D1Q8N7M0 179 aa0.46□□□□□ -2.34
LINC00397-201ENST00000422074 TSKUQ8WUA8 353 aa0.46□□□□□ -2.34
LINC00397-201ENST00000422074 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.46□□□□□ -2.34
LINC00397-201ENST00000422074 FGD6Q6ZV73 1430 aa0.46□□□□□ -2.34
LINC00397-201ENST00000422074 DSPPQ9NZW4 1301 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.45□□□□□ -2.34
LINC00397-201ENST00000422074 TRBV27A0A0K0K1C4 114 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 A0A1W2PPB8 328 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 A0A1W2PRE2 83 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 A0A1W2PRS3 328 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 KIR3DP1A8MWS1 328 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 EDF1O60869 148 aaKnown RBP0.45□□□□□ -2.34
LINC00397-201ENST00000422074 IGHV3-30P01768 117 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 GYPBP06028 91 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 IGHV3-30-5P0DP03 117 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 DNAJB13P59910 316 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 IZUMO2Q6UXV1 221 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 TMEM229BQ8NBD8 167 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 OR8J3Q8NGG0 315 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 PLAC4Q8WY50 150 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 FKBP11Q9NYL4 201 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 MED31Q9Y3C7 131 aa0.45□□□□□ -2.34
LINC00397-201ENST00000422074 PBRM1Q86U86 1689 aa0.44□□□□□ -2.34
LINC00397-201ENST00000422074 ETV6P41212 452 aa0.44□□□□□ -2.34
LINC00397-201ENST00000422074 XAF1Q6GPH4 301 aa0.44□□□□□ -2.34
LINC00397-201ENST00000422074 HRCT1Q6UXD1 115 aa0.44□□□□□ -2.34
LINC00397-201ENST00000422074 MORN4Q8NDC4 146 aa0.44□□□□□ -2.34
LINC00397-201ENST00000422074 OR51A4Q8NGJ6 313 aa0.44□□□□□ -2.34
LINC00397-201ENST00000422074 THEM6Q8WUY1 208 aa0.44□□□□□ -2.34
LINC00397-201ENST00000422074 TRAPPC2LQ9UL33 140 aa0.44□□□□□ -2.34
LINC00397-201ENST00000422074 ASCC3Q8N3C0 2202 aaKnown RBP0.44□□□□□ -2.34
LINC00397-201ENST00000422074 ANK1P16157 1881 aa0.44□□□□□ -2.34
LINC00397-201ENST00000422074 MED12Q93074 2177 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 ZGRF1Q86YA3 2104 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 LOC285556D6RIA3 1793 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 A6NN06 94 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 H3BMG7 143 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 FABP1P07148 127 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 EVI2AP22794 236 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms