RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RBMY1CP0DJD4 496 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 HTN1P15515 57 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 EMP1P54849 157 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 RBMY1FQ15415 496 aaKnown RBP11.4□□□□□ -0.58
BRAT1-202ENST00000421712 STOML3Q8TAV4 291 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 FAM213BQ8TBF2 198 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 VGLL1Q99990 258 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 MAP1LC3BQ9GZQ8 125 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 C11orf68Q9H3H3 251 aaKnown RBP11.4□□□□□ -0.58
BRAT1-202ENST00000421712 STAB2Q8WWQ8 2551 aa11.39□□□□□ -0.59
BRAT1-202ENST00000421712 DIRC3C9JPN6 131 aa11.39□□□□□ -0.59
BRAT1-202ENST00000421712 FHITP49789 147 aa11.39□□□□□ -0.59
BRAT1-202ENST00000421712 RRN3P1Q2M238 152 aa11.39□□□□□ -0.59
BRAT1-202ENST00000421712 EIF5AL1Q6IS14 154 aaKnown RBP11.39□□□□□ -0.59
BRAT1-202ENST00000421712 C9orf47Q6ZRZ4 202 aa11.39□□□□□ -0.59
BRAT1-202ENST00000421712 C11orf45Q8TAV5 145 aa11.39□□□□□ -0.59
BRAT1-202ENST00000421712 ODF3Q96PU9 254 aa11.39□□□□□ -0.59
BRAT1-202ENST00000421712 NEU1Q99519 415 aa11.39□□□□□ -0.59
BRAT1-202ENST00000421712 TMPRSS5Q9H3S3 457 aa11.39□□□□□ -0.59
BRAT1-202ENST00000421712 CXorf65A6NEN9 183 aa11.38□□□□□ -0.59
BRAT1-202ENST00000421712 UBE2G2P60604 165 aa11.38□□□□□ -0.59
BRAT1-202ENST00000421712 SUMO1P63165 101 aaKnown RBP11.38□□□□□ -0.59
BRAT1-202ENST00000421712 PMS2P11Q13670 270 aa11.38□□□□□ -0.59
BRAT1-202ENST00000421712 KIR3DS1Q14943 382 aa11.38□□□□□ -0.59
BRAT1-202ENST00000421712 SLC51BQ86UW2 128 aa11.38□□□□□ -0.59
BRAT1-202ENST00000421712 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
BRAT1-202ENST00000421712 TRAV12-3A0A0B4J271 114 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 A0A1B0GV50 99 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 RBAKDNA6NC62 111 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 ZNF705GA8MUZ8 300 aaPredicted RBP11.37□□□□□ -0.59
BRAT1-202ENST00000421712 GPX1P07203 203 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 ZNF138P52744 262 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 GNG5P63218 68 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 TMEM256Q8N2U0 113 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 SUN5Q8TC36 379 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 SFT2D1Q8WV19 159 aa11.37□□□□□ -0.59
BRAT1-202ENST00000421712 LOC102723971A0A1B0GUV8 181 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 TMEM189A5PLL7 270 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 IFNA7P01567 189 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 PRM2P04554 102 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 RNASE4P34096 147 aaKnown RBP11.36□□□□□ -0.59
BRAT1-202ENST00000421712 NANOS2P60321 138 aaKnown RBP11.36□□□□□ -0.59
BRAT1-202ENST00000421712 GFI1BQ5VTD9 330 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 DPPA3Q6W0C5 159 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 C9orf62Q8N4C0 152 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 Q8TAT8 98 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 NIPSNAP3BQ9BS92 247 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 ZNF492Q9P255 531 aa11.36□□□□□ -0.59
BRAT1-202ENST00000421712 A0A1W2PRE2 83 aa11.35□□□□□ -0.59
BRAT1-202ENST00000421712 K7EQM0 130 aa11.35□□□□□ -0.59
BRAT1-202ENST00000421712 CASC10Q5T4H9 136 aa11.35□□□□□ -0.59
BRAT1-202ENST00000421712 C5orf17Q8NAS9 161 aa11.35□□□□□ -0.59
BRAT1-202ENST00000421712 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
BRAT1-202ENST00000421712 C7orf71A4D174 169 aa11.34□□□□□ -0.59
BRAT1-202ENST00000421712 H7BYZ3 331 aa11.34□□□□□ -0.59
BRAT1-202ENST00000421712 H2AFB1P0C5Y9 115 aa11.34□□□□□ -0.59
BRAT1-202ENST00000421712 NKX2-5P52952 324 aaPredicted RBP11.34□□□□□ -0.59
BRAT1-202ENST00000421712 TAS2R60P59551 318 aa11.34□□□□□ -0.59
BRAT1-202ENST00000421712 BTN1A1Q13410 526 aa11.34□□□□□ -0.59
BRAT1-202ENST00000421712 ARL6IP6Q8N6S5 226 aa11.34□□□□□ -0.59
BRAT1-202ENST00000421712 EPDR1Q9UM22 224 aa11.34□□□□□ -0.59
BRAT1-202ENST00000421712 GGTLC3B5MD39 225 aa11.33□□□□□ -0.6
BRAT1-202ENST00000421712 SPART-AS1P0CW21 52 aa11.33□□□□□ -0.6
BRAT1-202ENST00000421712 CRISP2P16562 243 aa11.33□□□□□ -0.6
BRAT1-202ENST00000421712 RAB5CP51148 216 aa11.33□□□□□ -0.6
BRAT1-202ENST00000421712 CST9LP1Q5W188 147 aa11.33□□□□□ -0.6
BRAT1-202ENST00000421712 CCDC28AQ8IWP9 274 aa11.33□□□□□ -0.6
BRAT1-202ENST00000421712 MBD3L1Q8WWY6 194 aa11.33□□□□□ -0.6
BRAT1-202ENST00000421712 FAM19A4Q96LR4 140 aa11.33□□□□□ -0.6
BRAT1-202ENST00000421712 SGK494Q96LW2 274 aa11.33□□□□□ -0.6
BRAT1-202ENST00000421712 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
BRAT1-202ENST00000421712 TRAV8-1A0A0A6YYK1 113 aa11.32□□□□□ -0.6
BRAT1-202ENST00000421712 SERTM2A0A1B0GWG4 89 aa11.32□□□□□ -0.6
BRAT1-202ENST00000421712 FAM74A7A6NL05 159 aa11.32□□□□□ -0.6
BRAT1-202ENST00000421712 KLLNB2CW77 178 aa11.32□□□□□ -0.6
BRAT1-202ENST00000421712 TCRAP04437 139 aa11.32□□□□□ -0.6
BRAT1-202ENST00000421712 NMBP08949 121 aa11.32□□□□□ -0.6
BRAT1-202ENST00000421712 AZU1P20160 251 aa11.32□□□□□ -0.6
BRAT1-202ENST00000421712 PHLDA1Q8WV24 401 aaPredicted RBP11.32□□□□□ -0.6
BRAT1-202ENST00000421712 NKX6-2Q9C056 277 aaPredicted RBP11.32□□□□□ -0.6
BRAT1-202ENST00000421712 CELA1Q9UNI1 258 aa11.32□□□□□ -0.6
BRAT1-202ENST00000421712 TRBV7-9A0A0J9YWB2 115 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 TEX46H3BTG2 121 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 SULT1A2P50226 295 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 FAM222AQ5U5X8 452 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 ZNF767PQ75MW2 155 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 C16orf74Q96GX8 76 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 PYGO2Q9BRQ0 406 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 ATG101Q9BSB4 218 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 LENEPQ9Y5L5 61 aa11.31□□□□□ -0.6
BRAT1-202ENST00000421712 RGS13O14921 159 aa11.3□□□□□ -0.6
BRAT1-202ENST00000421712 PAGE4O60829 102 aa11.3□□□□□ -0.6
BRAT1-202ENST00000421712 PRNTQ86SH4 94 aa11.3□□□□□ -0.6
BRAT1-202ENST00000421712 TREM1Q9NP99 234 aa11.3□□□□□ -0.6
BRAT1-202ENST00000421712 TEX48A0A1B0GUV7 120 aa11.29□□□□□ -0.6
BRAT1-202ENST00000421712 NUPR2A6NF83 97 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms