RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 MPDU1O75352 247 aa7.72□□□□□ -1.17
SSBP3-206ENST00000420121 ATP5G1P05496 136 aa7.72□□□□□ -1.17
SSBP3-206ENST00000420121 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
SSBP3-206ENST00000420121 ATP5G3P48201 142 aa7.72□□□□□ -1.17
SSBP3-206ENST00000420121 ERCC8Q13216 396 aa7.72□□□□□ -1.17
SSBP3-206ENST00000420121 SMUG1Q53HV7 270 aa7.72□□□□□ -1.17
SSBP3-206ENST00000420121 THAP6Q8TBB0 222 aa7.72□□□□□ -1.17
SSBP3-206ENST00000420121 MARVELD1Q9BSK0 173 aa7.72□□□□□ -1.17
SSBP3-206ENST00000420121 TRAV12-3A0A0B4J271 114 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 E5RGE8 158 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 INMT-MINDY4F8WBC2 141 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 PRAF2O60831 178 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 PDE6HQ13956 83 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 LRRC37A5PQ49AS3 106 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 MIR17HGQ75NE6 70 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 EXOC3-AS1Q8N2X6 119 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 RNF141Q8WVD5 230 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 BATF3Q9NR55 127 aa7.71□□□□□ -1.18
SSBP3-206ENST00000420121 MUC4Q99102 2169 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 KLLNB2CW77 178 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 J3KRW8 73 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 RGS13O14921 159 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 ZNF324O75467 553 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-206ENST00000420121 HOXA5P20719 270 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 LEPP41159 167 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 CLINT1Q14677 625 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 LINC00469Q8N7U9 141 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 ZNRF2Q8NHG8 242 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 PPP1R1CQ8WVI7 109 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 WDR61Q9GZS3 305 aaKnown RBP7.7□□□□□ -1.18
SSBP3-206ENST00000420121 SLC25A31Q9H0C2 315 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 AGPAT4-IT1Q9H0P7 198 aa7.7□□□□□ -1.18
SSBP3-206ENST00000420121 PRSS47A8MTI9 375 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 SLC25A5P05141 298 aaKnown RBP7.69□□□□□ -1.18
SSBP3-206ENST00000420121 FAM3BP58499 235 aaPredicted RBP7.69□□□□□ -1.18
SSBP3-206ENST00000420121 CD300CQ08708 224 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 PRR9Q5T870 116 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 C9orf47Q6ZRZ4 202 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 ZFAND2AQ8N6M9 145 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 C11orf72Q8NBR9 251 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 BLNKQ8WV28 456 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 FXYD5Q96DB9 178 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 ZNF503Q96F45 646 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 LINC00477Q96M19 166 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 PYGO2Q9BRQ0 406 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 LINC00588Q9Y4M8 146 aa7.69□□□□□ -1.18
SSBP3-206ENST00000420121 IGKV2-40A0A087WW87 121 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-206ENST00000420121 C7orf71A4D174 169 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 MPC2O95563 127 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 NUDT3O95989 172 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 IGKV2D-40P01614 121 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-206ENST00000420121 RLN2P04090 185 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 NBEAP1P0C6P0 100 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 CRISP2P16562 243 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 CYCSP99999 105 aaKnown RBP7.68□□□□□ -1.18
SSBP3-206ENST00000420121 DAZ2Q13117 558 aaKnown RBP7.68□□□□□ -1.18
SSBP3-206ENST00000420121 BTN1A1Q13410 526 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 ICAM4Q14773 271 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 Q6ZQT7 251 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 PHYHIPLQ96FC7 376 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 VGLL1Q99990 258 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 LINC00467Q9BRT7 94 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 TIMM9Q9Y5J7 89 aa7.68□□□□□ -1.18
SSBP3-206ENST00000420121 GAGE12BA1L429 117 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 GAGE7O76087 117 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 OR10J4P0C629 311 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 GAGE12FP0CL80 117 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 GAGE12GP0CL81 117 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 GAGE12IP0CL82 117 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 FAM122CQ6P4D5 195 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 Q6ZTI0 123 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 CCDC28AQ8IWP9 274 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 ATP5SQ99766 215 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 MRPL32Q9BYC8 188 aaKnown RBP7.67□□□□□ -1.18
SSBP3-206ENST00000420121 OR51M1Q9H341 326 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 FUT9Q9Y231 359 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 HSPB11Q9Y547 144 aa7.67□□□□□ -1.18
SSBP3-206ENST00000420121 TRAV26-1A0A087WT03 109 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 NBDYA0A0U1RRE5 68 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 SNURFLB1AK76 121 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 NMBP08949 121 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 ANXA2RQ3ZCQ2 193 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 C1orf134Q5TEV5 83 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 RXFP4Q8TDU9 374 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 C18orf15Q96N68 181 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 ATG101Q9BSB4 218 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 PAXXQ9BUH6 204 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 TMPRSS5Q9H3S3 457 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 WFDC1Q9HC57 220 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 GSN-AS1Q9NRJ2 163 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 ZNF492Q9P255 531 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 TP53TG3Q9ULZ0 132 aa7.66□□□□□ -1.18
SSBP3-206ENST00000420121 A0A0J9YY99 117 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 EIF3GO75821 320 aaKnown RBP eCLIP7.65□□□□□ -1.18
SSBP3-206ENST00000420121 M6PRP20645 277 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 RNASE4P34096 147 aaKnown RBP7.65□□□□□ -1.18
SSBP3-206ENST00000420121 OR5I1Q13606 314 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 SSX7Q7RTT5 188 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 EIF4E3Q8N5X7 224 aaKnown RBP7.65□□□□□ -1.18
SSBP3-206ENST00000420121 Q8TAT8 98 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms