RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 RAX2Q96IS3 184 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 IGF2BP2-AS1Q96M15 143 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 NRN1Q9NPD7 142 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 TRAV8-1A0A0A6YYK1 113 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 ZNF705FA8MVS1 300 aaPredicted RBP9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 PPP1R2P9O14990 202 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 FOLR2P14207 255 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 CBLN1P23435 193 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 ERVFC1-1P60608 527 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 FLI1Q01543 452 aaPredicted RBP9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 OR5I1Q13606 314 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 PSG3Q16557 428 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 ARL6IP6Q8N6S5 226 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 C15orf54Q8N8G6 183 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 TMEM75Q8N9X5 138 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 OR10G8Q8NGN5 311 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 SFRP2Q96HF1 295 aa9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 HUWE1Q7Z6Z7 4374 aaKnown RBP9.93□□□□□ -0.82
HLA-DMB-258ENST00000418107 IGKV2-40A0A087WW87 121 aaPredicted RBP9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 K7EN84 100 aa9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 IGKV2D-40P01614 121 aaPredicted RBP9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 SAMD13Q5VXD3 122 aa9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 PRR27Q6MZM9 219 aa9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 ZNF738Q8NE65 137 aa9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 OR9G4Q8NGQ1 327 aa9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 DYNLRB2Q8TF09 96 aa9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 DLX4Q92988 240 aaPredicted RBP9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 BIN3Q9NQY0 253 aa9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 PSG8Q9UQ74 426 aa9.92□□□□□ -0.82
HLA-DMB-258ENST00000418107 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
HLA-DMB-258ENST00000418107 FBLL1A6NHQ2 334 aaKnown RBP9.91□□□□□ -0.82
HLA-DMB-258ENST00000418107 S100PP25815 95 aa9.91□□□□□ -0.82
HLA-DMB-258ENST00000418107 TFPI2P48307 235 aa9.91□□□□□ -0.82
HLA-DMB-258ENST00000418107 PAFAH1B2P68402 229 aa9.91□□□□□ -0.82
HLA-DMB-258ENST00000418107 Q86TA4 180 aa9.91□□□□□ -0.82
HLA-DMB-258ENST00000418107 MRPL53Q96EL3 112 aaKnown RBP9.91□□□□□ -0.82
HLA-DMB-258ENST00000418107 GPR61Q9BZJ8 451 aa9.91□□□□□ -0.82
HLA-DMB-258ENST00000418107 URGCP-MRPS24S4R325 110 aa9.91□□□□□ -0.82
HLA-DMB-258ENST00000418107 CXorf65A6NEN9 183 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 GCGP01275 180 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 LTAP01374 205 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 IGLV2-8P01709 118 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 DAZAP1Q96EP5 407 aaKnown RBP9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 SMIM12Q96EX1 92 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 NDFIP1Q9BT67 221 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 MS4A6AQ9H2W1 248 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 TUBA4BQ9H853 241 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 TMEM242Q9NWH2 141 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 MLXQ9UH92 298 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 ZFP30Q9Y2G7 519 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 SORL1Q92673 2214 aa9.9□□□□□ -0.82
HLA-DMB-258ENST00000418107 EPPK1P58107 5090 aaKnown RBP9.9□□□□□ -0.83
HLA-DMB-258ENST00000418107 TRBV6-1A0A0K0K1D8 114 aa9.89□□□□□ -0.83
HLA-DMB-258ENST00000418107 OVOL1O14753 267 aa9.89□□□□□ -0.83
HLA-DMB-258ENST00000418107 IBA57Q5T440 356 aaKnown RBP9.89□□□□□ -0.83
HLA-DMB-258ENST00000418107 RBPMS2Q6ZRY4 209 aaKnown RBP9.89□□□□□ -0.83
HLA-DMB-258ENST00000418107 VGLL1Q99990 258 aa9.89□□□□□ -0.83
HLA-DMB-258ENST00000418107 OSTCQ9NRP0 149 aa9.89□□□□□ -0.83
HLA-DMB-258ENST00000418107 U3KQK5 164 aa9.89□□□□□ -0.83
HLA-DMB-258ENST00000418107 STAB2Q8WWQ8 2551 aa9.89□□□□□ -0.83
HLA-DMB-258ENST00000418107 RBAKDNA6NC62 111 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 ZNF705GA8MUZ8 300 aaPredicted RBP9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 PRAC2D3DTV9 90 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 GATCO43716 136 aaKnown RBP9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 IGLV2-11P01706 119 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 CSN3P07498 182 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 CT45A10P0DMU9 189 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 ERCC8Q13216 396 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 TMEM78Q5T7P6 136 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 KCNIP4Q6PIL6 250 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 FAM24BQ8N5W8 94 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 OR10J6PQ8NGY7 276 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 C20orf173Q96LM9 149 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 ASCL2Q99929 193 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 RNASE7Q9H1E1 156 aaKnown RBP9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 BIRC6Q9NR09 4857 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 SNRPD3P62318 126 aaKnown RBP9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 FHL3Q13643 280 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 SAPCD1Q5SSQ6 148 aa9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 MCRIP2Q9BUT9 160 aaKnown RBP9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 TMA7Q9Y2S6 64 aaKnown RBP9.88□□□□□ -0.83
HLA-DMB-258ENST00000418107 DNAH7Q8WXX0 4024 aa9.87□□□□□ -0.83
HLA-DMB-258ENST00000418107 SOCS3O14543 225 aa9.87□□□□□ -0.83
HLA-DMB-258ENST00000418107 NHLRC4P0CG21 123 aaPredicted RBP9.87□□□□□ -0.83
HLA-DMB-258ENST00000418107 MLST8Q9BVC4 326 aa9.87□□□□□ -0.83
HLA-DMB-258ENST00000418107 COLCA2A8K830 154 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 P01737 135 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 ZNF138P52744 262 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 HIST1H1AQ02539 215 aaPredicted RBP9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 PSMG4Q5JS54 123 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 ADAMTSL5Q6ZMM2 481 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 NUDT10Q8NFP7 164 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 Q8TAT8 98 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 DCANP1Q8TF63 244 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 NUDT11Q96G61 164 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 C8orf49Q96NF6 230 aa9.86□□□□□ -0.83
HLA-DMB-258ENST00000418107 PRR25Q96S07 402 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms