RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 HIST1H1AQ02539 215 aaPredicted RBP6.41□□□□□ -1.38
LINC01238-201ENST00000416204 GAMTQ14353 236 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 OR8G2PQ6IF36 304 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 TMEM144Q7Z5S9 345 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 ZNF738Q8NE65 137 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 TMED6Q8WW62 240 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 UPK3BQ9BT76 320 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 CACFD1Q9UGQ2 172 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 STRAPQ9Y3F4 350 aaKnown RBP6.41□□□□□ -1.38
LINC01238-201ENST00000416204 TIMM8BQ9Y5J9 83 aaPredicted RBP6.41□□□□□ -1.38
LINC01238-201ENST00000416204 RNF213Q63HN8 5207 aa6.41□□□□□ -1.38
LINC01238-201ENST00000416204 DUSP14O95147 198 aaKnown RBP6.4□□□□□ -1.38
LINC01238-201ENST00000416204 POLR2GP62487 172 aaKnown RBP eCLIP6.4□□□□□ -1.38
LINC01238-201ENST00000416204 KIR3DS1Q14943 382 aa6.4□□□□□ -1.38
LINC01238-201ENST00000416204 C1orf194Q5T5A4 169 aa6.4□□□□□ -1.38
LINC01238-201ENST00000416204 TMEM252Q8N6L7 170 aa6.4□□□□□ -1.38
LINC01238-201ENST00000416204 OR52E5Q8NH55 327 aa6.4□□□□□ -1.38
LINC01238-201ENST00000416204 C16orf74Q96GX8 76 aa6.4□□□□□ -1.38
LINC01238-201ENST00000416204 PARD6GQ9BYG4 376 aaPredicted RBP6.4□□□□□ -1.38
LINC01238-201ENST00000416204 TMPRSS5Q9H3S3 457 aa6.4□□□□□ -1.38
LINC01238-201ENST00000416204 PPP1R14DQ9NXH3 145 aa6.4□□□□□ -1.38
LINC01238-201ENST00000416204 A0A087WTM6 91 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 FAM24AA6NFZ4 105 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 UMAD1C9J7I0 102 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 SSSCA1O60232 199 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 GCSHP23434 173 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 GATA2P23769 480 aaPredicted RBP6.39□□□□□ -1.39
LINC01238-201ENST00000416204 GALR1P47211 349 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 CAV2P51636 162 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 TAS2R60P59551 318 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 AARDQ4LEZ3 155 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 CDPF1Q6NVV7 123 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 STX12Q86Y82 276 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 LYPD6BQ8NI32 183 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 SLC35E1Q96K37 410 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 RBKSQ9H477 322 aa6.39□□□□□ -1.39
LINC01238-201ENST00000416204 A0A096LPF7 62 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 IGSF23A1L1A6 192 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 ZNF98A6NK75 572 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 J3KRW8 73 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 SIVA1O15304 175 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 SYNGR2O43760 224 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 NXPH4O95158 308 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 SNRPCP09234 159 aaKnown RBP6.38□□□□□ -1.39
LINC01238-201ENST00000416204 ORM2P19652 201 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 MEOX2P50222 304 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 SULT1A1P50225 295 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 NHLH2Q02577 135 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 PXDC1Q5TGL8 231 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 DPPA3Q6W0C5 159 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 OR10J6PQ8NGY7 276 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 RNASE8Q8TDE3 154 aaKnown RBP6.38□□□□□ -1.39
LINC01238-201ENST00000416204 DTD1Q8TEA8 209 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 ZNF503Q96F45 646 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 CIB3Q96Q77 187 aaPredicted RBP6.38□□□□□ -1.39
LINC01238-201ENST00000416204 SMIM3Q9BZL3 60 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 WFDC1Q9HC57 220 aa6.38□□□□□ -1.39
LINC01238-201ENST00000416204 IGKV1OR2-108A0A075B7D4 117 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 TMEM218A2RU14 115 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 B2MP61769 119 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 HBG1P69891 147 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 HBG2P69892 147 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 ATP6V1FQ16864 119 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 TMEM182Q6ZP80 229 aaPredicted RBP6.37□□□□□ -1.39
LINC01238-201ENST00000416204 Q6ZTI0 123 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 BPIFCQ8NFQ6 507 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 OR1B1Q8NGR6 318 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 SUN5Q8TC36 379 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 TMEM263Q8WUH6 116 aaKnown RBP6.37□□□□□ -1.39
LINC01238-201ENST00000416204 VSIG2Q96IQ7 327 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 ATP5SQ99766 215 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 SMDT1Q9H4I9 107 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 PSENENQ9NZ42 101 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 HSPB7Q9UBY9 170 aa6.37□□□□□ -1.39
LINC01238-201ENST00000416204 IAPPP10997 89 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 CAMLGP49069 296 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 PEA15Q15121 130 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 C10orf91Q5T1B1 145 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
LINC01238-201ENST00000416204 SAMD13Q5VXD3 122 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 Q6ZRG5 221 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 TMEM256Q8N2U0 113 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 OR8A1Q8NGG7 326 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 OR5C1Q8NGR4 320 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 SEC11CQ9BY50 192 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 FAM30AQ9NZY2 134 aa6.36□□□□□ -1.39
LINC01238-201ENST00000416204 CARHSP1Q9Y2V2 147 aaKnown RBP6.36□□□□□ -1.39
LINC01238-201ENST00000416204 FABP1P07148 127 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 ATP6V0CP27449 155 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 GPX4P36969 197 aaPredicted RBP6.35□□□□□ -1.39
LINC01238-201ENST00000416204 RAB2AP61019 212 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 RPP30P78346 268 aaKnown RBP6.35□□□□□ -1.39
LINC01238-201ENST00000416204 ZNF493Q6ZR52 646 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 SVBPQ8N300 66 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 LINC00612Q8N6U2 182 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 OR2G3Q8NGZ4 309 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 SCGB1C1Q8TD33 95 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 TRGV9Q99603 122 aa6.35□□□□□ -1.39
LINC01238-201ENST00000416204 PSMG3Q9BT73 122 aaPredicted RBP6.35□□□□□ -1.39
LINC01238-201ENST00000416204 TMEM147Q9BVK8 224 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms