RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 ALPK3Q96L96 1907 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 HRNRQ86YZ3 2850 aaPredicted RBP-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 PLXNA4Q9HCM2 1894 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 UBR5O95071 2799 aaPredicted RBP-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 TENM4Q6N022 2769 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 TAF1LQ8IZX4 1826 aa-0.01□□□□□ -2.41
TRAPPC13-203ENST00000415825 JMJD1CQ15652 2540 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 CREBBPQ92793 2442 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 ABCA2Q9BZC7 2435 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 NISCHQ9Y2I1 1504 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 ABCA1O95477 2261 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 TNCP24821 2201 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 CADP27708 2225 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 CACNA1CQ13936 2221 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 KDM6AO15550 1401 aaPredicted RBP-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 UHRF1BP1Q6BDS2 1440 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 CPDO75976 1380 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 CHD3Q12873 2000 aaKnown RBP-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 MYH10P35580 1976 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 UNC79Q9P2D8 2635 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 TRBV27A0A0K0K1C4 114 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 LOC101927531A0A1B0GV80 90 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 MAP1LC3B2A6NCE7 125 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 PPP5D1E7EU14 171 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 GPR31O00270 319 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 KPNA4O00629 521 aaPredicted RBP-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 CDC42EP2O14613 210 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 IFNA14P01570 189 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 IGKCP01834 107 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 MT-ND6P03923 174 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 TFF1P04155 84 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 FABP2P12104 132 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 SLC25A4P12235 298 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 FABP4P15090 132 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 SERPINB1P30740 379 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 SPINT3P49223 89 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 POLR2HP52434 150 aaKnown RBP-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 ZNF137PP52743 207 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 SPINK7P58062 85 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 BLCAPP62952 87 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 ZNF56Q15929 161 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 VMA21Q3ZAQ7 101 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 GLYATL3Q5SZD4 288 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 C6orf52Q5T4I8 152 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 C3orf33Q6P1S2 294 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 Q6ZQY7 126 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 DEFB132Q7Z7B7 95 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 TMED4Q7Z7H5 227 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 STX12Q86Y82 276 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 FAM24BQ8N5W8 94 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 C5orf56Q8N8D9 126 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 C5orf17Q8NAS9 161 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 ZNF431Q8TF32 576 aaPredicted RBP-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 DYDC1Q8WWB3 177 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 OR4C12Q96R67 309 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 MAP1LC3BQ9GZQ8 125 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 CST11Q9H112 138 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 BIN3Q9NQY0 253 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 CBLN4Q9NTU7 201 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 PLAC8Q9NZF1 115 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 STOML2Q9UJZ1 356 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 TPRKBQ9Y3C4 175 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 MYO5AQ9Y4I1 1855 aaKnown RBP-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 F8P00451 2351 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 WNK1Q9H4A3 2382 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 PEAK1Q9H792 1746 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 HIVEP1P15822 2718 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 TRPM1Q7Z4N2 1603 aa-0.02□□□□□ -2.41
TRAPPC13-203ENST00000415825 OTOGQ6ZRI0 2925 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 FAM135BQ49AJ0 1406 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 PTPRQQ9UMZ3 2332 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 DSPPQ9NZW4 1301 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 ABCA12Q86UK0 2595 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 A0A096LPI6 279 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 LOC107984156A0A0G2JMH3 177 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 LOC107984640A0A0U1RRK4 108 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 C3orf85A0A1B0GTC6 90 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 H3BMG7 143 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 H3BQV1 296 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 M0QZK8 103 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 LYRM1O43325 122 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 TRACP01848 142 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 APOA2P02652 100 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 IFNA4P05014 189 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 FABP1P07148 127 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 BCL2P10415 239 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 CCL4P13236 92 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 FXYD6P3P58550 94 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 VBP1P61758 197 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 MRPS36P82909 103 aaKnown RBP-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 FXYD3Q14802 87 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 NEDD8Q15843 81 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 IZUMO2Q6UXV1 221 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 CASC2Q6XLA1 102 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 LINC00305Q7Z4B0 112 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 ARL17AQ8IVW1 177 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 TMEM229BQ8NBD8 167 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 MORN4Q8NDC4 146 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 OR5H6Q8NGV6 325 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms