RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 J3QLI3 93 aa16.14■□□□□ 0.17
AP1S3-205ENST00000415298 HOXA3O43365 443 aaPredicted RBP16.14■□□□□ 0.17
AP1S3-205ENST00000415298 IGLV2-14P01704 120 aa16.14■□□□□ 0.17
AP1S3-205ENST00000415298 HLA-DRB4P13762 266 aa16.14■□□□□ 0.17
AP1S3-205ENST00000415298 ZNF137PP52743 207 aa16.14■□□□□ 0.17
AP1S3-205ENST00000415298 C15orf53Q8NAA6 179 aa16.14■□□□□ 0.17
AP1S3-205ENST00000415298 HLA-DRB4X5D2U9 266 aa16.14■□□□□ 0.17
AP1S3-205ENST00000415298 HELZ2Q9BYK8 2649 aaKnown RBP16.13■□□□□ 0.17
AP1S3-205ENST00000415298 DEFB108AA8MXU0 73 aa16.13■□□□□ 0.17
AP1S3-205ENST00000415298 SHISA9B4DS77 424 aa16.13■□□□□ 0.17
AP1S3-205ENST00000415298 M0R2P5 195 aa16.13■□□□□ 0.17
AP1S3-205ENST00000415298 DAZAP2Q15038 168 aaPredicted RBP16.13■□□□□ 0.17
AP1S3-205ENST00000415298 LYRM7Q5U5X0 104 aa16.13■□□□□ 0.17
AP1S3-205ENST00000415298 FLYWCH2Q96CP2 140 aaKnown RBP16.13■□□□□ 0.17
AP1S3-205ENST00000415298 TMSB15BA0A087X1C1 80 aa16.12■□□□□ 0.17
AP1S3-205ENST00000415298 PLEKHA3Q9HB20 300 aa16.12■□□□□ 0.17
AP1S3-205ENST00000415298 P0C879 139 aa16.12■□□□□ 0.17
AP1S3-205ENST00000415298 SCGB1C2P0DMR2 95 aa16.12■□□□□ 0.17
AP1S3-205ENST00000415298 C3orf22Q8N5N4 141 aa16.12■□□□□ 0.17
AP1S3-205ENST00000415298 RITA1Q96K30 269 aa16.12■□□□□ 0.17
AP1S3-205ENST00000415298 IGHV3-64DA0A0J9YX35 117 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 CA6P23280 308 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 LOXP28300 417 aaPredicted RBP16.11■□□□□ 0.17
AP1S3-205ENST00000415298 DUX4L9Q6RFH8 374 aaPredicted RBP16.11■□□□□ 0.17
AP1S3-205ENST00000415298 SSMEM1Q8WWF3 244 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 HIST1H4GQ99525 98 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A10PA6NDY2 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A20PA6NIJ5 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A7PA6NKC0 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A22PA8MWA6 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A12PA8MX19 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A23PA8MXZ1 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A15PP0C7V4 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A13PP0C7W8 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A14PP0C7W9 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FAM90A24PP0C7X0 464 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 SRSF2Q01130 221 aaKnown RBP16.11■□□□□ 0.17
AP1S3-205ENST00000415298 KLF17Q5JT82 389 aaPredicted RBP16.11■□□□□ 0.17
AP1S3-205ENST00000415298 ODF3Q96PU9 254 aa16.11■□□□□ 0.17
AP1S3-205ENST00000415298 FGF23Q9GZV9 251 aaPredicted RBP16.11■□□□□ 0.17
AP1S3-205ENST00000415298 TRAV8-1A0A0A6YYK1 113 aa16.1■□□□□ 0.17
AP1S3-205ENST00000415298 IFI27L1Q96BM0 104 aa16.1■□□□□ 0.17
AP1S3-205ENST00000415298 E7EQL1 145 aa16.1■□□□□ 0.17
AP1S3-205ENST00000415298 CD3EP07766 207 aa16.1■□□□□ 0.17
AP1S3-205ENST00000415298 MIR17HGQ75NE6 70 aa16.1■□□□□ 0.17
AP1S3-205ENST00000415298 DKK2Q9UBU2 259 aa16.1■□□□□ 0.17
AP1S3-205ENST00000415298 ACTL6BO94805 426 aa16.09■□□□□ 0.17
AP1S3-205ENST00000415298 PGLYRP4Q96LB8 373 aa16.09■□□□□ 0.17
AP1S3-205ENST00000415298 A0A1W2PPR1 153 aa16.09■□□□□ 0.17
AP1S3-205ENST00000415298 J3QKU1 62 aa16.09■□□□□ 0.17
AP1S3-205ENST00000415298 NUP37Q8NFH4 326 aa16.09■□□□□ 0.17
AP1S3-205ENST00000415298 AKAP6Q13023 2319 aa16.08■□□□□ 0.17
AP1S3-205ENST00000415298 LOC107984156A0A0G2JMH3 177 aa16.08■□□□□ 0.17
AP1S3-205ENST00000415298 TIMM8AO60220 97 aaPredicted RBP16.08■□□□□ 0.17
AP1S3-205ENST00000415298 C8orf88P0DMB2 117 aa16.08■□□□□ 0.17
AP1S3-205ENST00000415298 UBE2D3P61077 147 aa16.08■□□□□ 0.17
AP1S3-205ENST00000415298 UBE2D2P62837 147 aa16.08■□□□□ 0.17
AP1S3-205ENST00000415298 SIGLEC15Q6ZMC9 328 aa16.08■□□□□ 0.17
AP1S3-205ENST00000415298 ARL17AQ8IVW1 177 aa16.08■□□□□ 0.17
AP1S3-205ENST00000415298 EPDR1Q9UM22 224 aa16.08■□□□□ 0.17
AP1S3-205ENST00000415298 IQCF6A8MYZ5 107 aa16.08■□□□□ 0.16
AP1S3-205ENST00000415298 CRYGDP07320 174 aa16.08■□□□□ 0.16
AP1S3-205ENST00000415298 TRPT1Q86TN4 253 aaKnown RBP16.08■□□□□ 0.16
AP1S3-205ENST00000415298 C7orf69Q9H7B7 122 aa16.08■□□□□ 0.16
AP1S3-205ENST00000415298 HHLA3Q9XRX5 114 aa16.08■□□□□ 0.16
AP1S3-205ENST00000415298 AGRNO00468 2067 aa16.08■□□□□ 0.16
AP1S3-205ENST00000415298 MYMXA0A1B0GTQ4 84 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 H3BVH4 76 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 EDDM3AQ14507 147 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 CT83Q5H943 113 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 ZFP2Q6ZN57 461 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 RPP21Q9H633 154 aaKnown RBP16.07■□□□□ 0.16
AP1S3-205ENST00000415298 USP9YO00507 2555 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-205ENST00000415298 UQCRQO14949 82 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 COL8A2P25067 703 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 FCER1GP30273 86 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 SPINK9Q5DT21 86 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 ZCCHC24Q8N2G6 241 aaKnown RBP16.07■□□□□ 0.16
AP1S3-205ENST00000415298 RFESDQ8TAC1 157 aa16.07■□□□□ 0.16
AP1S3-205ENST00000415298 CACNA1DQ01668 2161 aa16.06■□□□□ 0.16
AP1S3-205ENST00000415298 TRBV7-3A0A075B6L6 115 aa16.06■□□□□ 0.16
AP1S3-205ENST00000415298 IGLV3-9A0A075B6K5 115 aa16.06■□□□□ 0.16
AP1S3-205ENST00000415298 IGHV3-13P01766 116 aa16.06■□□□□ 0.16
AP1S3-205ENST00000415298 LINC00526Q96FQ7 95 aa16.06■□□□□ 0.16
AP1S3-205ENST00000415298 DOPEY2Q9Y3R5 2298 aa16.05■□□□□ 0.16
AP1S3-205ENST00000415298 TACC2O95359 2948 aa16.05■□□□□ 0.16
AP1S3-205ENST00000415298 HBDP02042 147 aa16.05■□□□□ 0.16
AP1S3-205ENST00000415298 DLX6P56179 175 aa16.05■□□□□ 0.16
AP1S3-205ENST00000415298 C4orf26Q17RF5 130 aa16.05■□□□□ 0.16
AP1S3-205ENST00000415298 HRCT1Q6UXD1 115 aa16.05■□□□□ 0.16
AP1S3-205ENST00000415298 GFRA4Q9GZZ7 299 aa16.05■□□□□ 0.16
AP1S3-205ENST00000415298 ZMAT4Q9H898 229 aa16.05■□□□□ 0.16
AP1S3-205ENST00000415298 TMEM160Q9NX00 188 aa16.05■□□□□ 0.16
AP1S3-205ENST00000415298 LOXL1Q08397 574 aaPredicted RBP16.05■□□□□ 0.16
AP1S3-205ENST00000415298 KLK5Q9Y337 293 aaPredicted RBP16.05■□□□□ 0.16
AP1S3-205ENST00000415298 OR11H6Q8NGC7 330 aa16.04■□□□□ 0.16
AP1S3-205ENST00000415298 ZNF503Q96F45 646 aa16.04■□□□□ 0.16
AP1S3-205ENST00000415298 TRAV2A0A0B4J234 112 aa16.04■□□□□ 0.16
AP1S3-205ENST00000415298 LINC01619G3V211 115 aa16.04■□□□□ 0.16
AP1S3-205ENST00000415298 HAX1O00165 279 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms