RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 SERTM2A0A1B0GWG4 89 aa11.94□□□□□ -0.5
LINC00398-201ENST00000414407 IGKV2D-40P01614 121 aaPredicted RBP11.94□□□□□ -0.5
LINC00398-201ENST00000414407 NMBP08949 121 aa11.94□□□□□ -0.5
LINC00398-201ENST00000414407 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
LINC00398-201ENST00000414407 ERCC8Q13216 396 aa11.94□□□□□ -0.5
LINC00398-201ENST00000414407 IQCF2Q8IXL9 164 aa11.94□□□□□ -0.5
LINC00398-201ENST00000414407 C1orf158Q8N1D5 194 aa11.94□□□□□ -0.5
LINC00398-201ENST00000414407 C5orf17Q8NAS9 161 aa11.94□□□□□ -0.5
LINC00398-201ENST00000414407 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
LINC00398-201ENST00000414407 C20orf144Q9BQM9 153 aa11.94□□□□□ -0.5
LINC00398-201ENST00000414407 NKX6-2Q9C056 277 aaPredicted RBP11.94□□□□□ -0.5
LINC00398-201ENST00000414407 SULT1A2P50226 295 aa11.93□□□□□ -0.5
LINC00398-201ENST00000414407 TMEM256Q8N2U0 113 aa11.93□□□□□ -0.5
LINC00398-201ENST00000414407 Q8NAQ8 132 aa11.93□□□□□ -0.5
LINC00398-201ENST00000414407 SFT2D1Q8WV19 159 aa11.93□□□□□ -0.5
LINC00398-201ENST00000414407 VGLL1Q99990 258 aa11.93□□□□□ -0.5
LINC00398-201ENST00000414407 TMPRSS5Q9H3S3 457 aa11.93□□□□□ -0.5
LINC00398-201ENST00000414407 ZNF492Q9P255 531 aa11.93□□□□□ -0.5
LINC00398-201ENST00000414407 LENEPQ9Y5L5 61 aa11.93□□□□□ -0.5
LINC00398-201ENST00000414407 ARL2-SNX15V9GYD0 113 aa11.93□□□□□ -0.5
LINC00398-201ENST00000414407 TRAV12-2A0A075B6T6 113 aa11.92□□□□□ -0.5
LINC00398-201ENST00000414407 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
LINC00398-201ENST00000414407 GGTLC3B5MD39 225 aa11.92□□□□□ -0.5
LINC00398-201ENST00000414407 H2AFB1P0C5Y9 115 aa11.92□□□□□ -0.5
LINC00398-201ENST00000414407 CRISP2P16562 243 aa11.92□□□□□ -0.5
LINC00398-201ENST00000414407 ZNF138P52744 262 aa11.92□□□□□ -0.5
LINC00398-201ENST00000414407 NKX2-5P52952 324 aaPredicted RBP11.92□□□□□ -0.5
LINC00398-201ENST00000414407 SUMO1P63165 101 aaKnown RBP11.92□□□□□ -0.5
LINC00398-201ENST00000414407 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
LINC00398-201ENST00000414407 FAM74A7A6NL05 159 aa11.91□□□□□ -0.5
LINC00398-201ENST00000414407 IL17DQ8TAD2 202 aa11.91□□□□□ -0.5
LINC00398-201ENST00000414407 TMEM208Q9BTX3 173 aa11.91□□□□□ -0.5
LINC00398-201ENST00000414407 EPDR1Q9UM22 224 aa11.91□□□□□ -0.5
LINC00398-201ENST00000414407 IGHV4-28A0A0C4DH34 117 aa11.9□□□□□ -0.5
LINC00398-201ENST00000414407 KLLNB2CW77 178 aa11.9□□□□□ -0.5
LINC00398-201ENST00000414407 K7EQM0 130 aa11.9□□□□□ -0.5
LINC00398-201ENST00000414407 TCRAP04437 139 aa11.9□□□□□ -0.5
LINC00398-201ENST00000414407 PPT1P50897 306 aa11.9□□□□□ -0.5
LINC00398-201ENST00000414407 GOLT1AQ6ZVE7 132 aa11.9□□□□□ -0.5
LINC00398-201ENST00000414407 TCEAL7Q9BRU2 100 aa11.9□□□□□ -0.5
LINC00398-201ENST00000414407 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.5
LINC00398-201ENST00000414407 IGHV3OR16-12A0A075B7B8 117 aa11.89□□□□□ -0.51
LINC00398-201ENST00000414407 TMEM189A5PLL7 270 aa11.89□□□□□ -0.51
LINC00398-201ENST00000414407 FBLL1A6NHQ2 334 aaKnown RBP11.89□□□□□ -0.51
LINC00398-201ENST00000414407 TEX46H3BTG2 121 aa11.89□□□□□ -0.51
LINC00398-201ENST00000414407 HBE1P02100 147 aa11.89□□□□□ -0.51
LINC00398-201ENST00000414407 RBMY1A1P0DJD3 496 aaKnown RBP11.89□□□□□ -0.51
LINC00398-201ENST00000414407 RBMY1CP0DJD4 496 aa11.89□□□□□ -0.51
LINC00398-201ENST00000414407 UBE2G2P60604 165 aa11.89□□□□□ -0.51
LINC00398-201ENST00000414407 RBMY1FQ15415 496 aaKnown RBP11.89□□□□□ -0.51
LINC00398-201ENST00000414407 GFI1BQ5VTD9 330 aa11.89□□□□□ -0.51
LINC00398-201ENST00000414407 MUC7Q8TAX7 377 aa11.89□□□□□ -0.51
LINC00398-201ENST00000414407 RPH3ALQ9UNE2 315 aa11.89□□□□□ -0.51
LINC00398-201ENST00000414407 H7BYZ3 331 aa11.88□□□□□ -0.51
LINC00398-201ENST00000414407 TAS2R60P59551 318 aa11.88□□□□□ -0.51
LINC00398-201ENST00000414407 GNG5P63218 68 aa11.88□□□□□ -0.51
LINC00398-201ENST00000414407 KIR3DS1Q14943 382 aa11.88□□□□□ -0.51
LINC00398-201ENST00000414407 RRN3P1Q2M238 152 aa11.88□□□□□ -0.51
LINC00398-201ENST00000414407 ZFAND2AQ8N6M9 145 aa11.88□□□□□ -0.51
LINC00398-201ENST00000414407 ATG101Q9BSB4 218 aa11.88□□□□□ -0.51
LINC00398-201ENST00000414407 C7orf71A4D174 169 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 IFNA7P01567 189 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 GPX1P07203 203 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 CCDC28AQ8IWP9 274 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 CYB561D1Q8N8Q1 229 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 Q8TAT8 98 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 HIST1H2BAQ96A08 127 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 LINC01587Q99440 93 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 NIPSNAP3BQ9BS92 247 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 BOLA1Q9Y3E2 137 aa11.87□□□□□ -0.51
LINC00398-201ENST00000414407 DEFB4AO15263 64 aa11.86□□□□□ -0.51
LINC00398-201ENST00000414407 ZNF324O75467 553 aaPredicted RBP11.86□□□□□ -0.51
LINC00398-201ENST00000414407 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
LINC00398-201ENST00000414407 TMEM75Q8N9X5 138 aa11.86□□□□□ -0.51
LINC00398-201ENST00000414407 TRAV12-3A0A0B4J271 114 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 LOC102723971A0A1B0GUV8 181 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 F6UZH7 168 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 J3KRW8 73 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 PAGE4O60829 102 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 CST9LP1Q5W188 147 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 ALKAL2Q6UX46 152 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 C11orf45Q8TAV5 145 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 PYGO2Q9BRQ0 406 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 LINC00467Q9BRT7 94 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 MANBALQ9NQG1 85 aa11.85□□□□□ -0.51
LINC00398-201ENST00000414407 TRAV8-1A0A0A6YYK1 113 aa11.84□□□□□ -0.51
LINC00398-201ENST00000414407 TEX48A0A1B0GUV7 120 aa11.84□□□□□ -0.51
LINC00398-201ENST00000414407 A0A1B0GV50 99 aa11.84□□□□□ -0.51
LINC00398-201ENST00000414407 PEX7O00628 323 aa11.84□□□□□ -0.51
LINC00398-201ENST00000414407 IGLV2-11P01706 119 aa11.84□□□□□ -0.51
LINC00398-201ENST00000414407 RNASE4P34096 147 aaKnown RBP11.84□□□□□ -0.51
LINC00398-201ENST00000414407 BTN1A1Q13410 526 aa11.84□□□□□ -0.51
LINC00398-201ENST00000414407 ZNF493Q6ZR52 646 aa11.84□□□□□ -0.51
LINC00398-201ENST00000414407 NDFIP1Q9BT67 221 aa11.84□□□□□ -0.51
LINC00398-201ENST00000414407 PSG8Q9UQ74 426 aa11.84□□□□□ -0.51
LINC00398-201ENST00000414407 ZNF705GA8MUZ8 300 aaPredicted RBP11.83□□□□□ -0.52
LINC00398-201ENST00000414407 BLOC1S1P78537 153 aa11.83□□□□□ -0.52
LINC00398-201ENST00000414407 CCL20P78556 96 aa11.83□□□□□ -0.52
LINC00398-201ENST00000414407 FLI1Q01543 452 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms