RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 TAS2R4Q9NYW5 299 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 TAC3Q9UHF0 121 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 RGPD2P0DJD1 1756 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 EIF2AK4Q9P2K8 1649 aaKnown RBP2.63□□□□□ -1.99
SF3B1-203ENST00000414174 MRC1P22897 1456 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 USP54Q70EL1 1684 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 PREX1Q8TCU6 1659 aa2.63□□□□□ -1.99
SF3B1-203ENST00000414174 ANKRD31Q8N7Z5 1873 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 ERCC6L2Q5T890 1561 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 KIDINS220Q9ULH0 1771 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 IGHV7-81A0A0B4J1V7 117 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 A0A1W2PQD3 144 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 NDUFC1O43677 76 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 TSHBP01222 138 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 IGKV1-16P04430 117 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 CD28P10747 220 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 ELK1P19419 428 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 FUSP35637 526 aaKnown RBP eCLIP2.62□□□□□ -1.99
SF3B1-203ENST00000414174 EFNA4P52798 201 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 HERVK_113P61574 105 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 GNB1P62873 340 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 RPL30P62888 115 aaKnown RBP2.62□□□□□ -1.99
SF3B1-203ENST00000414174 REG3AQ06141 175 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 IL17AQ16552 155 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 Q1T7F1 81 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-203ENST00000414174 C9orf57Q5W0N0 161 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 RPL7L1Q6DKI1 246 aaKnown RBP2.62□□□□□ -1.99
SF3B1-203ENST00000414174 IGFL3Q6UXB1 125 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 PATE2Q6UY27 113 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 SDIM1Q6ZPB5 146 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 FAM72BQ86X60 149 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 BAGE3Q86Y29 109 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 BAGE2Q86Y30 109 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 TMEM252Q8N6L7 170 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 CLDND2Q8NHS1 167 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 CCL4L1Q8NHW4 92 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 SMIM4Q8WVI0 70 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 URB1-AS1Q96HZ7 61 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 CYSTM1Q9H1C7 97 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 SND1-IT1Q9HBX3 110 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 PIK3C2AO00443 1686 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 MYOM1P52179 1685 aa2.62□□□□□ -1.99
SF3B1-203ENST00000414174 GPATCH8Q9UKJ3 1502 aaKnown RBP2.62□□□□□ -1.99
SF3B1-203ENST00000414174 GREB1LQ9C091 1923 aaPredicted RBP2.62□□□□□ -1.99
SF3B1-203ENST00000414174 RGPD4Q7Z3J3 1758 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 DOCK2Q92608 1830 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 USP32Q8NFA0 1604 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 TOPAZ1Q8N9V7 1692 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 IGHV3OR15-7A0A075B7D8 119 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 IGKV6D-21A0A0A0MT36 114 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 IGHV1-24A0A0C4DH33 117 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 IGKV1-12A0A0C4DH73 117 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 TMEM272A0A1B0GTI8 110 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 A0A1W2PS18 150 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 C2orf70A6NJV1 201 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 FXYD1O00168 92 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 PEX7O00628 323 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 LY6G6DO95868 133 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 IGKV1D-12P01611 117 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 IGHV3-48P01763 117 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 SLC25A16P16260 332 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 CKS2P33552 79 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 RPL18Q07020 188 aaKnown RBP2.61□□□□□ -1.99
SF3B1-203ENST00000414174 ZNF816Q0VGE8 651 aaPredicted RBP2.61□□□□□ -1.99
SF3B1-203ENST00000414174 FHL1Q13642 323 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 CIRBPQ14011 172 aaKnown RBP2.61□□□□□ -1.99
SF3B1-203ENST00000414174 FAM104BQ5XKR9 115 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 NOXRED1Q6NXP6 359 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 CEMP1Q6PRD7 247 aaPredicted RBP2.61□□□□□ -1.99
SF3B1-203ENST00000414174 C16orf47Q6ZP98 133 aaPredicted RBP2.61□□□□□ -1.99
SF3B1-203ENST00000414174 CYP2G1PQ6ZSU1 146 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 TMEM61Q8N0U2 210 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 ZNF645Q8N7E2 425 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 FAM216BQ8N7L0 139 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 NRACQ8N912 160 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 PRSS3P2Q8NHM4 247 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 RMI2Q96E14 147 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 OSTCQ9NRP0 149 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 MRPL35Q9NZE8 188 aaKnown RBP2.61□□□□□ -1.99
SF3B1-203ENST00000414174 KIAA1210Q9ULL0 1709 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 LAMB1P07942 1786 aa2.61□□□□□ -1.99
SF3B1-203ENST00000414174 CICQ96RK0 1608 aaPredicted RBP2.6□□□□□ -1.99
SF3B1-203ENST00000414174 MYLKQ15746 1914 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 COL5A3P25940 1745 aaPredicted RBP2.6□□□□□ -1.99
SF3B1-203ENST00000414174 SCN2AQ99250 2005 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 IGLV5-52A0A0A0MRZ9 124 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 IGKV6-21A0A0C4DH24 114 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 TCRBV4S1A1TA0A5B7 111 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 BMPR1BO00238 502 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 CPSF4O95639 269 aaKnown RBP2.6□□□□□ -1.99
SF3B1-203ENST00000414174 BGLAPP02818 100 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 SAA1P0DJI8 122 aaPredicted RBP2.6□□□□□ -1.99
SF3B1-203ENST00000414174 ZNF32P17041 273 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 MDKP21741 143 aaPredicted RBP2.6□□□□□ -1.99
SF3B1-203ENST00000414174 LMO2P25791 158 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 ZNF791Q3KP31 576 aaPredicted RBP2.6□□□□□ -1.99
SF3B1-203ENST00000414174 DAND5Q8N907 189 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 CSNK1G2-AS1Q8NCQ2 148 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 PPP1R1CQ8WVI7 109 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms