RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 GATA2P23769 480 aaPredicted RBP6.72□□□□□ -1.33
RFFL-203ENST00000413582 CDC34P49427 236 aaPredicted RBP6.72□□□□□ -1.33
RFFL-203ENST00000413582 FXYD7P58549 80 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 DEFB1P60022 68 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 USF2Q15853 346 aaPredicted RBP6.72□□□□□ -1.33
RFFL-203ENST00000413582 GDF5OSQ5U4N7 250 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 C10orf113Q5VZT2 155 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 PATE2Q6UY27 113 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 FAM213BQ8TBF2 198 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 RNF125Q96EQ8 232 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 ATG101Q9BSB4 218 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 NRN1Q9NPD7 142 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 FUT9Q9Y231 359 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 HIGD1AQ9Y241 93 aa6.72□□□□□ -1.33
RFFL-203ENST00000413582 YTHDF2Q9Y5A9 579 aaKnown RBP6.72□□□□□ -1.33
RFFL-203ENST00000413582 LOC102723971A0A1B0GUV8 181 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 LINC00862A6NCI5 91 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 IGKV3-20P01619 116 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 STAG3L2P0CL84 134 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 STAG3L3P0CL85 134 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 ORM2P19652 201 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 TAGLN2P37802 199 aaKnown RBP6.71□□□□□ -1.34
RFFL-203ENST00000413582 PPT1P50897 306 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 KRTAP10-2P60368 255 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 LYZP61626 148 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 C1orf194Q5T5A4 169 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 FAM78BQ5VT40 261 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 PQLC2Q6ZP29 291 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 OR1B1Q8NGR6 318 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 TMEM37Q8WXS4 190 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 RAB24Q969Q5 203 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 MYCBP2O75592 4640 aa6.71□□□□□ -1.34
RFFL-203ENST00000413582 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 NDUFS6O75380 124 aaKnown RBP6.7□□□□□ -1.34
RFFL-203ENST00000413582 CXorf1O96002 111 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 PSMB3P49720 205 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 FHITP49789 147 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 DAD1P61803 113 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 ZNF726P1Q15940 193 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 KHDC3LQ587J8 217 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 FAM122CQ6P4D5 195 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 SIGLEC15Q6ZMC9 328 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 LINC00305Q7Z4B0 112 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 C1orf158Q8N1D5 194 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 SFT2D1Q8WV19 159 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 GPR82Q96P67 336 aa6.7□□□□□ -1.34
RFFL-203ENST00000413582 SAV1Q9H4B6 383 aaPredicted RBP6.7□□□□□ -1.34
RFFL-203ENST00000413582 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 RAB19A4D1S5 217 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 MAP1LC3B2A6NCE7 125 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 H3BRN7 92 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 BUB3O43684 328 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 GCSAMLQ5JQS6 135 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 FOXI2Q6ZQN5 318 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 SUN5Q8TC36 379 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 TXNDC17Q9BRA2 123 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 SHANK2-AS3Q9BTD1 123 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 PBDC1Q9BVG4 233 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 SLC25A39Q9BZJ4 359 aaPredicted RBP6.69□□□□□ -1.34
RFFL-203ENST00000413582 MAP1LC3BQ9GZQ8 125 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 SLC35B3Q9H1N7 401 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 SMDT1Q9H4I9 107 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 TMEM167BQ9NRX6 74 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 TMEM14CQ9P0S9 112 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 GOLT1BQ9Y3E0 138 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 ARL2-SNX15V9GYD0 113 aa6.69□□□□□ -1.34
RFFL-203ENST00000413582 ZNF98A6NK75 572 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 IFNA1P01562 189 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 INAFM2P0DMQ5 153 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 MEOX2P50222 304 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 RRN3P1Q2M238 152 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 MIR17HGQ75NE6 70 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 BPIFA4PQ86YQ2 179 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 EIF4E3Q8N5X7 224 aaKnown RBP6.68□□□□□ -1.34
RFFL-203ENST00000413582 FAM167A-AS1Q96KT0 104 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 OR51M1Q9H341 326 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 SLC25A22Q9H936 323 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 MANBALQ9NQG1 85 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 LINC00588Q9Y4M8 146 aa6.68□□□□□ -1.34
RFFL-203ENST00000413582 SOCS3O14543 225 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
RFFL-203ENST00000413582 NUDT3O95989 172 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 RPL7P18124 248 aaKnown RBP6.67□□□□□ -1.34
RFFL-203ENST00000413582 BTF3P20290 206 aaKnown RBP6.67□□□□□ -1.34
RFFL-203ENST00000413582 GCHFRP30047 84 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 GUK1Q16774 197 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 UQCC3Q6UW78 93 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 SSX7Q7RTT5 188 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 OR4B1Q8NGF8 309 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 FAM210AQ96ND0 272 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 UHRF2Q96PU4 802 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 PAXXQ9BUH6 204 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 NKX6-2Q9C056 277 aaPredicted RBP6.67□□□□□ -1.34
RFFL-203ENST00000413582 DOK5Q9P104 306 aa6.67□□□□□ -1.34
RFFL-203ENST00000413582 F6UB75 175 aa6.66□□□□□ -1.34
RFFL-203ENST00000413582 ZNF253O75346 499 aa6.66□□□□□ -1.34
RFFL-203ENST00000413582 ARL14EPLP0DKL9 152 aa6.66□□□□□ -1.34
RFFL-203ENST00000413582 HIST1H1EP10412 219 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms