RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 PRAC2D3DTV9 90 aa11.6□□□□□ -0.55
TTC39A-208ENST00000413473 KLRB1Q12918 225 aa11.6□□□□□ -0.55
TTC39A-208ENST00000413473 ANKRD39Q53RE8 183 aa11.6□□□□□ -0.55
TTC39A-208ENST00000413473 NHLH1Q02575 133 aa11.6□□□□□ -0.55
TTC39A-208ENST00000413473 C2orf91Q6ZV80 131 aa11.6□□□□□ -0.55
TTC39A-208ENST00000413473 SIRPDQ9H106 197 aa11.6□□□□□ -0.55
TTC39A-208ENST00000413473 CBY1Q9Y3M2 126 aa11.6□□□□□ -0.55
TTC39A-208ENST00000413473 A0A1W2PPR1 153 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 CBY3A6NI87 242 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 HBDP02042 147 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 PAX8Q06710 450 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 OR4C5Q8NGB2 326 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 ZNF502Q8TBZ5 544 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 IGHV3-66A0A0C4DH42 116 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 FABP5P3A8MUU1 101 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 CACNG7P62955 275 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 RNF182Q8N6D2 247 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 RNASE8Q8TDE3 154 aaKnown RBP11.59□□□□□ -0.55
TTC39A-208ENST00000413473 RAXQ9Y2V3 346 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 BUB3O43684 328 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 LGALS9BQ3B8N2 356 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 LGALS9CQ6DKI2 356 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 DTX2Q86UW9 622 aa11.59□□□□□ -0.55
TTC39A-208ENST00000413473 FAM110DQ8TAY7 271 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-208ENST00000413473 IGHV3OR16-13A0A075B7E8 117 aa11.58□□□□□ -0.56
TTC39A-208ENST00000413473 IGHV3-74A0A0B4J1X5 117 aa11.58□□□□□ -0.56
TTC39A-208ENST00000413473 S100A7P31151 101 aa11.58□□□□□ -0.56
TTC39A-208ENST00000413473 TCTAP57738 103 aa11.58□□□□□ -0.56
TTC39A-208ENST00000413473 PRSS57Q6UWY2 283 aa11.58□□□□□ -0.56
TTC39A-208ENST00000413473 ZFAND3Q9H8U3 227 aa11.58□□□□□ -0.56
TTC39A-208ENST00000413473 SPTAN1Q13813 2472 aaKnown RBP11.58□□□□□ -0.56
TTC39A-208ENST00000413473 ATP6V0E1O15342 81 aa11.58□□□□□ -0.56
TTC39A-208ENST00000413473 AJUBAQ96IF1 538 aa11.58□□□□□ -0.56
TTC39A-208ENST00000413473 G3V318 75 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 CD5LO43866 347 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 GAS8-AS1O95177 125 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 PPIFP30405 207 aaKnown RBP11.57□□□□□ -0.56
TTC39A-208ENST00000413473 IFI27L1Q96BM0 104 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 RNF185Q96GF1 192 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 LINC01548A6NM66 108 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 FGF6P10767 208 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 WFDC3Q8IUB2 231 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 PSMG3-AS1Q96PY0 264 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 SPTBN4Q9H254 2564 aa11.57□□□□□ -0.56
TTC39A-208ENST00000413473 UBE2E1P51965 193 aa11.56□□□□□ -0.56
TTC39A-208ENST00000413473 SRSF2Q01130 221 aaKnown RBP11.56□□□□□ -0.56
TTC39A-208ENST00000413473 CLEC19AQ6UXS0 136 aa11.56□□□□□ -0.56
TTC39A-208ENST00000413473 IL17RELQ6ZVW7 336 aa11.56□□□□□ -0.56
TTC39A-208ENST00000413473 DPF1Q92782 380 aa11.56□□□□□ -0.56
TTC39A-208ENST00000413473 GOSR1O95249 250 aa11.56□□□□□ -0.56
TTC39A-208ENST00000413473 AMMECR1LQ6DCA0 310 aa11.56□□□□□ -0.56
TTC39A-208ENST00000413473 NCOR2Q9Y618 2525 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 IGHV3-49A0A0A0MS15 119 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 CLPSL1A2RUU4 121 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 K7EP13 123 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 SAA4P35542 130 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 TMEM97Q5BJF2 176 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 CNFNQ9BYD5 112 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 RAB9AP51151 201 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 OR1N2Q8NGR9 330 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 CCDC140Q96MF4 163 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 ZFHX3Q15911 3703 aa11.55□□□□□ -0.56
TTC39A-208ENST00000413473 ZNF207O43670 478 aaKnown RBP11.54□□□□□ -0.56
TTC39A-208ENST00000413473 LINC01559Q495D7 138 aa11.54□□□□□ -0.56
TTC39A-208ENST00000413473 C18orf15Q96N68 181 aa11.54□□□□□ -0.56
TTC39A-208ENST00000413473 AGPAT4-IT1Q9H0P7 198 aa11.54□□□□□ -0.56
TTC39A-208ENST00000413473 MAP1LC3AQ9H492 121 aa11.54□□□□□ -0.56
TTC39A-208ENST00000413473 CHD8Q9HCK8 2581 aa11.54□□□□□ -0.56
TTC39A-208ENST00000413473 PPBPP02775 128 aa11.53□□□□□ -0.56
TTC39A-208ENST00000413473 EVI2AP22794 236 aa11.53□□□□□ -0.56
TTC39A-208ENST00000413473 UCNP55089 124 aa11.53□□□□□ -0.56
TTC39A-208ENST00000413473 BOD1L2Q8IYS8 172 aa11.53□□□□□ -0.56
TTC39A-208ENST00000413473 DKK2Q9UBU2 259 aa11.53□□□□□ -0.56
TTC39A-208ENST00000413473 IGKV3D-20A0A0C4DH25 116 aa11.53□□□□□ -0.56
TTC39A-208ENST00000413473 RBAKDNA6NC62 111 aa11.53□□□□□ -0.56
TTC39A-208ENST00000413473 GATA1P15976 413 aaPredicted RBP11.53□□□□□ -0.56
TTC39A-208ENST00000413473 SLC50A1Q9BRV3 221 aa11.53□□□□□ -0.56
TTC39A-208ENST00000413473 UBTD1Q9HAC8 227 aa11.53□□□□□ -0.56
TTC39A-208ENST00000413473 TRAV8-6A0A0B4J262 113 aa11.52□□□□□ -0.56
TTC39A-208ENST00000413473 TNFRSF6BO95407 300 aa11.52□□□□□ -0.56
TTC39A-208ENST00000413473 RBX1P62877 108 aa11.52□□□□□ -0.56
TTC39A-208ENST00000413473 KLK9Q2XQG4 91 aa11.52□□□□□ -0.56
TTC39A-208ENST00000413473 C11orf21Q9P2W6 132 aa11.52□□□□□ -0.56
TTC39A-208ENST00000413473 KLK9Q9UKQ9 250 aa11.52□□□□□ -0.56
TTC39A-208ENST00000413473 C7orf71A4D174 169 aa11.52□□□□□ -0.57
TTC39A-208ENST00000413473 LEPP41159 167 aa11.52□□□□□ -0.57
TTC39A-208ENST00000413473 UQCRFS1P47985 274 aa11.52□□□□□ -0.57
TTC39A-208ENST00000413473 TRAV8-2A0A0B4J237 113 aa11.51□□□□□ -0.57
TTC39A-208ENST00000413473 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
TTC39A-208ENST00000413473 SMAD7O15105 426 aaKnown RBP11.51□□□□□ -0.57
TTC39A-208ENST00000413473 SEC11AP67812 179 aa11.51□□□□□ -0.57
TTC39A-208ENST00000413473 EEF1AKMT3Q96AZ1 226 aa11.51□□□□□ -0.57
TTC39A-208ENST00000413473 BPESC1Q9GZL8 116 aa11.51□□□□□ -0.57
TTC39A-208ENST00000413473 EFNA4P52798 201 aa11.51□□□□□ -0.57
TTC39A-208ENST00000413473 LMO4P61968 165 aa11.51□□□□□ -0.57
TTC39A-208ENST00000413473 PCP2Q8IVA1 136 aa11.51□□□□□ -0.57
TTC39A-208ENST00000413473 METTL26Q96S19 204 aa11.51□□□□□ -0.57
TTC39A-208ENST00000413473 A1L4Q6 167 aa11.5□□□□□ -0.57
TTC39A-208ENST00000413473 NMUP48645 174 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms