RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PSG8Q9UQ74 426 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 TENM1Q9UKZ4 2725 aa4.99□□□□□ -1.61
VPS41-204ENST00000413141 TRAV25A0A0B4J276 109 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 NPIPB6E9PJ23 425 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 SAP30O75446 220 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 GCGP01275 180 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 MT-ND4LP03901 98 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 ZNF688P0C7X2 276 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 MGST1P10620 155 aaKnown RBP4.98□□□□□ -1.61
VPS41-204ENST00000413141 SNRPD3P62318 126 aaKnown RBP4.98□□□□□ -1.61
VPS41-204ENST00000413141 PAFAH1B2P68402 229 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 ERCC8Q13216 396 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 OR5I1Q13606 314 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 PSMG4Q5JS54 123 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 TMEM88Q6PEY1 159 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 WFDC3Q8IUB2 231 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 TMEM183AQ8IXX5 376 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 SFRP2Q96HF1 295 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 ASCL2Q99929 193 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 SPAG8Q99932 426 aaPredicted RBP4.98□□□□□ -1.61
VPS41-204ENST00000413141 ZFP30Q9Y2G7 519 aa4.98□□□□□ -1.61
VPS41-204ENST00000413141 IZUMO1RA6ND01 250 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 OR4C46A6NHA9 309 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 F6UB75 175 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 H7BYZ3 331 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 IGLV1-51P01701 117 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 DEFB1P60022 68 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 HIST1H1AQ02539 215 aaPredicted RBP4.97□□□□□ -1.61
VPS41-204ENST00000413141 BTN1A1Q13410 526 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 IBA57Q5T440 356 aaKnown RBP4.97□□□□□ -1.61
VPS41-204ENST00000413141 TMEM78Q5T7P6 136 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 PRR27Q6MZM9 219 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 C9orf47Q6ZRZ4 202 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 FAM231DQ6ZW35 169 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 COX8CQ7Z4L0 72 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 OR8A1Q8NGG7 326 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 OR2K2Q8NGT1 345 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 OR10J6PQ8NGY7 276 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 ANAPC16Q96DE5 110 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 ZC2HC1AQ96GY0 325 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 C8orf49Q96NF6 230 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 PRR25Q96S07 402 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 NDFIP1Q9BT67 221 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 ZNF747Q9BV97 191 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 GPR61Q9BZJ8 451 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 CTDSP1Q9GZU7 261 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 AGPAT4-IT1Q9H0P7 198 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 RNASE7Q9H1E1 156 aaKnown RBP4.97□□□□□ -1.61
VPS41-204ENST00000413141 TMEM242Q9NWH2 141 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 ZNF492Q9P255 531 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 ATRQ13535 2644 aa4.97□□□□□ -1.61
VPS41-204ENST00000413141 A0A0J9YX75 114 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 C19orf71A6NCJ1 209 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 CXorf65A6NEN9 183 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 PPP1R2P9O14990 202 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 ZNF705DP0CH99 300 aaPredicted RBP4.96□□□□□ -1.62
VPS41-204ENST00000413141 ZNF705BP0CI00 300 aaPredicted RBP4.96□□□□□ -1.62
VPS41-204ENST00000413141 ZNF138P52744 262 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 ERVFC1-1P60608 527 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 SAPCD1Q5SSQ6 148 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 GDF5OSQ5U4N7 250 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 LINC00322Q6ZN03 302 aaPredicted RBP4.96□□□□□ -1.62
VPS41-204ENST00000413141 FOXI2Q6ZQN5 318 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 C15orf54Q8N8G6 183 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 OR10G8Q8NGN5 311 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 SPATA3Q8NHX4 192 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 TMEM158Q8WZ71 300 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 FAM19A4Q96LR4 140 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 YPEL4Q96NS1 127 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 MAP6D1Q9H9H5 199 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 BIN3Q9NQY0 253 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 OSTCQ9NRP0 149 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 SMCO4Q9NRQ5 59 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 PPP1R14DQ9NXH3 145 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 ZNF256Q9Y2P7 627 aaPredicted RBP4.96□□□□□ -1.62
VPS41-204ENST00000413141 V9GYV3 84 aa4.96□□□□□ -1.62
VPS41-204ENST00000413141 TRBV7-9A0A0J9YWB2 115 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 CT45A10P0DMU9 189 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 DEFB131AP59861 70 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 ODF3L2Q3SX64 289 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 SHISA2Q6UWI4 295 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 C12orf54Q6X4T0 127 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 C3orf56Q8N813 242 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 NUDT10Q8NFP7 164 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 NUDT11Q96G61 164 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 LINC00477Q96M19 166 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 SAV1Q9H4B6 383 aaPredicted RBP4.95□□□□□ -1.62
VPS41-204ENST00000413141 TUBA4BQ9H853 241 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 LENEPQ9Y5L5 61 aa4.95□□□□□ -1.62
VPS41-204ENST00000413141 FBN1P35555 2871 aaKnown RBP4.94□□□□□ -1.62
VPS41-204ENST00000413141 WNK1Q9H4A3 2382 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 ZNF705GA8MUZ8 300 aaPredicted RBP4.94□□□□□ -1.62
VPS41-204ENST00000413141 GATCO43716 136 aaKnown RBP4.94□□□□□ -1.62
VPS41-204ENST00000413141 SH2D1AO60880 128 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 DUSP14O95147 198 aaKnown RBP4.94□□□□□ -1.62
VPS41-204ENST00000413141 CA1P00915 261 aaPredicted RBP4.94□□□□□ -1.62
VPS41-204ENST00000413141 P01737 135 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 HLA-DRB4P13762 266 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 CRISP2P16562 243 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 CD33P20138 364 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms