RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 A0A0G2JLM5 398 aa18.79■□□□□ 0.6
VRK2-202ENST00000412104 RIGQ13278 110 aa18.79■□□□□ 0.6
VRK2-202ENST00000412104 MRPL53Q96EL3 112 aaKnown RBP18.79■□□□□ 0.6
VRK2-202ENST00000412104 FSHBP01225 129 aa18.78■□□□□ 0.6
VRK2-202ENST00000412104 ZNF664Q8N3J9 261 aa18.78■□□□□ 0.6
VRK2-202ENST00000412104 TPPP3Q9BW30 176 aa18.78■□□□□ 0.6
VRK2-202ENST00000412104 LOC102724200A0A096LPH7 203 aaPredicted RBP18.78■□□□□ 0.6
VRK2-202ENST00000412104 SMAD7O15105 426 aaKnown RBP18.78■□□□□ 0.6
VRK2-202ENST00000412104 BMI1P35226 326 aa18.77■□□□□ 0.6
VRK2-202ENST00000412104 NRN1Q9NPD7 142 aa18.77■□□□□ 0.6
VRK2-202ENST00000412104 RNF114Q9Y508 228 aa18.77■□□□□ 0.6
VRK2-202ENST00000412104 A0A1B0GW15 77 aa18.76■□□□□ 0.59
VRK2-202ENST00000412104 GATD1Q8NB37 220 aa18.76■□□□□ 0.59
VRK2-202ENST00000412104 USP9YO00507 2555 aaPredicted RBP18.76■□□□□ 0.59
VRK2-202ENST00000412104 FAM19A2Q8N3H0 131 aa18.76■□□□□ 0.59
VRK2-202ENST00000412104 BORCS7Q96B45 105 aa18.76■□□□□ 0.59
VRK2-202ENST00000412104 NPFFR1Q9GZQ6 430 aa18.76■□□□□ 0.59
VRK2-202ENST00000412104 PTPN13Q12923 2485 aa18.75■□□□□ 0.59
VRK2-202ENST00000412104 FAM209BQ5JX69 171 aa18.75■□□□□ 0.59
VRK2-202ENST00000412104 LYZL1Q6UWQ5 148 aa18.74■□□□□ 0.59
VRK2-202ENST00000412104 IL17RELQ6ZVW7 336 aa18.74■□□□□ 0.59
VRK2-202ENST00000412104 C16orf92Q96LL3 132 aa18.74■□□□□ 0.59
VRK2-202ENST00000412104 AGPAT4-IT1Q9H0P7 198 aa18.74■□□□□ 0.59
VRK2-202ENST00000412104 NTF3P20783 257 aa18.74■□□□□ 0.59
VRK2-202ENST00000412104 CTAG1AP78358 180 aa18.74■□□□□ 0.59
VRK2-202ENST00000412104 RNASEKQ6P5S7 137 aaKnown RBP18.74■□□□□ 0.59
VRK2-202ENST00000412104 C9orf139Q6ZV77 190 aa18.74■□□□□ 0.59
VRK2-202ENST00000412104 NIT1Q86X76 327 aa18.74■□□□□ 0.59
VRK2-202ENST00000412104 ZNF705DP0CH99 300 aaPredicted RBP18.73■□□□□ 0.59
VRK2-202ENST00000412104 ZNF705BP0CI00 300 aaPredicted RBP18.73■□□□□ 0.59
VRK2-202ENST00000412104 PSMB8P28062 276 aa18.73■□□□□ 0.59
VRK2-202ENST00000412104 RPS20P60866 119 aaKnown RBP18.73■□□□□ 0.59
VRK2-202ENST00000412104 Q96MF0 132 aa18.73■□□□□ 0.59
VRK2-202ENST00000412104 HSBP1O75506 76 aa18.72■□□□□ 0.59
VRK2-202ENST00000412104 DDTP30046 118 aa18.72■□□□□ 0.59
VRK2-202ENST00000412104 SRSF2Q01130 221 aaKnown RBP18.72■□□□□ 0.59
VRK2-202ENST00000412104 URB1-AS1Q96HZ7 61 aa18.72■□□□□ 0.59
VRK2-202ENST00000412104 CLEC5AQ9NY25 188 aa18.72■□□□□ 0.59
VRK2-202ENST00000412104 VPREB3Q9UKI3 123 aa18.72■□□□□ 0.59
VRK2-202ENST00000412104 KRTDAPP60985 99 aa18.72■□□□□ 0.59
VRK2-202ENST00000412104 GPHB5Q86YW7 130 aa18.72■□□□□ 0.59
VRK2-202ENST00000412104 CENPEQ02224 2701 aa18.71■□□□□ 0.59
VRK2-202ENST00000412104 FABP5P3A8MUU1 101 aa18.71■□□□□ 0.59
VRK2-202ENST00000412104 TMEM78Q5T7P6 136 aa18.71■□□□□ 0.59
VRK2-202ENST00000412104 Q6YL49 198 aa18.71■□□□□ 0.59
VRK2-202ENST00000412104 ZNF138P52744 262 aa18.7■□□□□ 0.58
VRK2-202ENST00000412104 C9orf47Q6ZRZ4 202 aa18.7■□□□□ 0.58
VRK2-202ENST00000412104 C20orf173Q96LM9 149 aa18.7■□□□□ 0.58
VRK2-202ENST00000412104 PEF1Q9UBV8 284 aaKnown RBP18.7■□□□□ 0.58
VRK2-202ENST00000412104 CTRLP40313 264 aa18.7■□□□□ 0.58
VRK2-202ENST00000412104 ZNF493Q6ZR52 646 aa18.7■□□□□ 0.58
VRK2-202ENST00000412104 ZNF575Q86XF7 245 aa18.7■□□□□ 0.58
VRK2-202ENST00000412104 KRTAP1-3Q8IUG1 177 aa18.7■□□□□ 0.58
VRK2-202ENST00000412104 PRRC2AP48634 2157 aaKnown RBP18.7■□□□□ 0.58
VRK2-202ENST00000412104 M0QZ24 198 aa18.69■□□□□ 0.58
VRK2-202ENST00000412104 ORM1P02763 201 aa18.69■□□□□ 0.58
VRK2-202ENST00000412104 IGLC6P0CF74 106 aa18.69■□□□□ 0.58
VRK2-202ENST00000412104 C10orf99Q6UWK7 81 aa18.69■□□□□ 0.58
VRK2-202ENST00000412104 TEX43Q6ZNM6 134 aa18.69■□□□□ 0.58
VRK2-202ENST00000412104 FER1L6-AS1Q8NA97 138 aa18.69■□□□□ 0.58
VRK2-202ENST00000412104 PSMG3-AS1Q96PY0 264 aa18.69■□□□□ 0.58
VRK2-202ENST00000412104 IGHV7-4-1A0A0J9YVY3 117 aa18.68■□□□□ 0.58
VRK2-202ENST00000412104 TMEM213A2RRL7 107 aa18.68■□□□□ 0.58
VRK2-202ENST00000412104 SOCS3O14543 225 aa18.68■□□□□ 0.58
VRK2-202ENST00000412104 LINC01559Q495D7 138 aa18.68■□□□□ 0.58
VRK2-202ENST00000412104 DAZ1Q9NQZ3 744 aaKnown RBP18.68■□□□□ 0.58
VRK2-202ENST00000412104 ZANQ9Y493 2812 aa18.68■□□□□ 0.58
VRK2-202ENST00000412104 M0R2Z0 102 aa18.68■□□□□ 0.58
VRK2-202ENST00000412104 TM4SF20Q53R12 229 aa18.68■□□□□ 0.58
VRK2-202ENST00000412104 Q8N976 141 aa18.68■□□□□ 0.58
VRK2-202ENST00000412104 ABCA12Q86UK0 2595 aa18.67■□□□□ 0.58
VRK2-202ENST00000412104 SSTP61278 116 aa18.67■□□□□ 0.58
VRK2-202ENST00000412104 ZNF738Q8NE65 137 aa18.67■□□□□ 0.58
VRK2-202ENST00000412104 NAV2Q8IVL1 2488 aa18.67■□□□□ 0.58
VRK2-202ENST00000412104 MUC21A0A0G2JKD1 596 aa18.66■□□□□ 0.58
VRK2-202ENST00000412104 MUC21A0A140T8X8 626 aa18.66■□□□□ 0.58
VRK2-202ENST00000412104 TMEM89A2RUT3 159 aa18.66■□□□□ 0.58
VRK2-202ENST00000412104 C3orf79P0CE67 100 aa18.66■□□□□ 0.58
VRK2-202ENST00000412104 DEFA6Q01524 100 aa18.66■□□□□ 0.58
VRK2-202ENST00000412104 MUC21Q5SSG8 566 aa18.66■□□□□ 0.58
VRK2-202ENST00000412104 RHPN1-AS1Q9BWJ2 59 aa18.66■□□□□ 0.58
VRK2-202ENST00000412104 PPP1R14DQ9NXH3 145 aa18.66■□□□□ 0.58
VRK2-202ENST00000412104 CHCHD1Q96BP2 118 aaKnown RBP18.66■□□□□ 0.58
VRK2-202ENST00000412104 KIR2DL5BA0A0G2JN68 375 aa18.65■□□□□ 0.58
VRK2-202ENST00000412104 KIR2DL5BA0A0G2JPC4 375 aa18.65■□□□□ 0.58
VRK2-202ENST00000412104 PRSS57Q6UWY2 283 aa18.65■□□□□ 0.58
VRK2-202ENST00000412104 KIR2DL5AQ8N109 375 aa18.65■□□□□ 0.58
VRK2-202ENST00000412104 HOXA3O43365 443 aaPredicted RBP18.64■□□□□ 0.58
VRK2-202ENST00000412104 HIST1H1AQ02539 215 aaPredicted RBP18.64■□□□□ 0.58
VRK2-202ENST00000412104 CYB5R2Q6BCY4 276 aa18.64■□□□□ 0.58
VRK2-202ENST00000412104 FAM181BA6NEQ2 426 aa18.64■□□□□ 0.57
VRK2-202ENST00000412104 RPL11P62913 178 aaKnown RBP18.64■□□□□ 0.57
VRK2-202ENST00000412104 FAM106AQ4KMX7 169 aa18.64■□□□□ 0.57
VRK2-202ENST00000412104 ZNF702PQ9H963 129 aa18.64■□□□□ 0.57
VRK2-202ENST00000412104 TDRG1Q3Y452 100 aa18.63■□□□□ 0.57
VRK2-202ENST00000412104 SMPXQ9UHP9 88 aa18.63■□□□□ 0.57
VRK2-202ENST00000412104 K7EMT4 169 aa18.62■□□□□ 0.57
VRK2-202ENST00000412104 RPLP1P05386 114 aaKnown RBP18.62■□□□□ 0.57
VRK2-202ENST00000412104 LINC00614P0C842 121 aa18.62■□□□□ 0.57
VRK2-202ENST00000412104 FAM104BQ5XKR9 115 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms