RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 CAMLGP49069 296 aa11.43□□□□□ -0.58
MRPL55-220ENST00000411464 NFE4Q86UQ8 179 aa11.43□□□□□ -0.58
MRPL55-220ENST00000411464 EIF4E3Q8N5X7 224 aaKnown RBP11.43□□□□□ -0.58
MRPL55-220ENST00000411464 C11orf72Q8NBR9 251 aa11.43□□□□□ -0.58
MRPL55-220ENST00000411464 FRZBQ92765 325 aa11.43□□□□□ -0.58
MRPL55-220ENST00000411464 TRAV9-2A0A087WT02 112 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 L7N2F9 121 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 ZNF253O75346 499 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 VAMP2P63027 116 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 RGS21Q2M5E4 152 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 ANXA2RQ3ZCQ2 193 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 OR1L4Q8NGR5 311 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 MRPL53Q96EL3 112 aaKnown RBP11.42□□□□□ -0.58
MRPL55-220ENST00000411464 LINC00467Q9BRT7 94 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 RCL1Q9Y2P8 373 aaKnown RBP11.42□□□□□ -0.58
MRPL55-220ENST00000411464 KLF12Q9Y4X4 402 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 TNFRSF18Q9Y5U5 241 aa11.42□□□□□ -0.58
MRPL55-220ENST00000411464 INMT-MINDY4F8WBC2 141 aa11.41□□□□□ -0.58
MRPL55-220ENST00000411464 MBPP02686 304 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-220ENST00000411464 RNASE4P34096 147 aaKnown RBP11.41□□□□□ -0.58
MRPL55-220ENST00000411464 CD300CQ08708 224 aa11.41□□□□□ -0.58
MRPL55-220ENST00000411464 ERCC8Q13216 396 aa11.41□□□□□ -0.58
MRPL55-220ENST00000411464 Q5VSD8 79 aa11.41□□□□□ -0.58
MRPL55-220ENST00000411464 C12orf45Q8N5I9 185 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-220ENST00000411464 ST6GAL2Q96JF0 529 aa11.41□□□□□ -0.58
MRPL55-220ENST00000411464 LINC00477Q96M19 166 aa11.41□□□□□ -0.58
MRPL55-220ENST00000411464 PFDN5Q99471 154 aa11.41□□□□□ -0.58
MRPL55-220ENST00000411464 SEC22CQ9BRL7 303 aa11.41□□□□□ -0.58
MRPL55-220ENST00000411464 PRO0255Q9UI72 69 aa11.41□□□□□ -0.58
MRPL55-220ENST00000411464 KLLNB2CW77 178 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 M0R3E3 92 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 SPINK4O60575 86 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 MPDU1O75352 247 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 IGHV3-53P01767 116 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 BCAP31P51572 246 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 TCL1AP56279 114 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 SLAQ13239 276 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 BTN1A1Q13410 526 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 MIC13Q5XKP0 118 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 MARVELD1Q9BSK0 173 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 HHLA3Q9XRX5 114 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 TIMM9Q9Y5J7 89 aa11.4□□□□□ -0.58
MRPL55-220ENST00000411464 DMBT1Q9UGM3 2413 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-220ENST00000411464 TRBV19A0A075B6N1 114 aa11.39□□□□□ -0.59
MRPL55-220ENST00000411464 A0A087WTM6 91 aa11.39□□□□□ -0.59
MRPL55-220ENST00000411464 GPX1P07203 203 aa11.39□□□□□ -0.59
MRPL55-220ENST00000411464 MRPL23Q16540 153 aaKnown RBP11.39□□□□□ -0.59
MRPL55-220ENST00000411464 LYPD5Q6UWN5 251 aa11.39□□□□□ -0.59
MRPL55-220ENST00000411464 AGPAT4-IT1Q9H0P7 198 aa11.39□□□□□ -0.59
MRPL55-220ENST00000411464 PRELID1Q9Y255 219 aa11.39□□□□□ -0.59
MRPL55-220ENST00000411464 RGS13O14921 159 aa11.38□□□□□ -0.59
MRPL55-220ENST00000411464 CST7O76096 145 aa11.38□□□□□ -0.59
MRPL55-220ENST00000411464 DNAH10OSP0CZ25 163 aa11.38□□□□□ -0.59
MRPL55-220ENST00000411464 CAV2P51636 162 aa11.38□□□□□ -0.59
MRPL55-220ENST00000411464 KRTAP10-1P60331 282 aa11.38□□□□□ -0.59
MRPL55-220ENST00000411464 IBA57Q5T440 356 aaKnown RBP11.38□□□□□ -0.59
MRPL55-220ENST00000411464 MITD1Q8WV92 249 aa11.38□□□□□ -0.59
MRPL55-220ENST00000411464 SLC39A9Q9NUM3 307 aa11.38□□□□□ -0.59
MRPL55-220ENST00000411464 UQCC1Q9NVA1 299 aa11.38□□□□□ -0.59
MRPL55-220ENST00000411464 MRPL16Q9NX20 251 aaKnown RBP11.38□□□□□ -0.59
MRPL55-220ENST00000411464 LY96Q9Y6Y9 160 aa11.38□□□□□ -0.59
MRPL55-220ENST00000411464 PRAF2O60831 178 aa11.37□□□□□ -0.59
MRPL55-220ENST00000411464 NMBP08949 121 aa11.37□□□□□ -0.59
MRPL55-220ENST00000411464 HIST1H1EP10412 219 aaKnown RBP11.37□□□□□ -0.59
MRPL55-220ENST00000411464 CRYBA4P53673 196 aa11.37□□□□□ -0.59
MRPL55-220ENST00000411464 ICAM4Q14773 271 aa11.37□□□□□ -0.59
MRPL55-220ENST00000411464 NEGR1Q7Z3B1 354 aa11.37□□□□□ -0.59
MRPL55-220ENST00000411464 FAM19A4Q96LR4 140 aa11.37□□□□□ -0.59
MRPL55-220ENST00000411464 C8orf49Q96NF6 230 aa11.37□□□□□ -0.59
MRPL55-220ENST00000411464 TMEM14CQ9P0S9 112 aa11.37□□□□□ -0.59
MRPL55-220ENST00000411464 WDR83OSQ9Y284 106 aa11.37□□□□□ -0.59
MRPL55-220ENST00000411464 LSM5Q9Y4Y9 91 aaKnown RBP11.37□□□□□ -0.59
MRPL55-220ENST00000411464 K7EP13 123 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 CRISP2P16562 243 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 RPL29P47914 159 aaKnown RBP11.36□□□□□ -0.59
MRPL55-220ENST00000411464 PDE6HQ13956 83 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 TMEM78Q5T7P6 136 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 BLNKQ8WV28 456 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 VGLL1Q99990 258 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 ARPC5LQ9BPX5 153 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 AAMDCQ9H7C9 122 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 MSRB1Q9NZV6 116 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 TP53TG3Q9ULZ0 132 aa11.36□□□□□ -0.59
MRPL55-220ENST00000411464 IGHV1OR15-1A0A075B7D0 117 aa11.35□□□□□ -0.59
MRPL55-220ENST00000411464 FAM25EA8MYX2 175 aa11.35□□□□□ -0.59
MRPL55-220ENST00000411464 NDUFB4O95168 129 aa11.35□□□□□ -0.59
MRPL55-220ENST00000411464 EVI2AP22794 236 aa11.35□□□□□ -0.59
MRPL55-220ENST00000411464 GCSHP23434 173 aa11.35□□□□□ -0.59
MRPL55-220ENST00000411464 BAXQ07812 192 aa11.35□□□□□ -0.59
MRPL55-220ENST00000411464 FHL2Q14192 279 aa11.35□□□□□ -0.59
MRPL55-220ENST00000411464 C9orf47Q6ZRZ4 202 aa11.35□□□□□ -0.59
MRPL55-220ENST00000411464 EXOC3-AS1Q8N2X6 119 aa11.35□□□□□ -0.59
MRPL55-220ENST00000411464 GPN1Q9HCN4 374 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-220ENST00000411464 TRGV4A0A0C4DH28 118 aa11.34□□□□□ -0.59
MRPL55-220ENST00000411464 UBE2L5PA0A1B0GUS4 154 aa11.34□□□□□ -0.59
MRPL55-220ENST00000411464 FAM24AA6NFZ4 105 aa11.34□□□□□ -0.59
MRPL55-220ENST00000411464 E5RGE8 158 aa11.34□□□□□ -0.59
MRPL55-220ENST00000411464 FAM229AH3BQW9 127 aa11.34□□□□□ -0.59
MRPL55-220ENST00000411464 CCSO14618 274 aa11.34□□□□□ -0.59
MRPL55-220ENST00000411464 SMR3BP02814 79 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms