RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 ZNF705DP0CH99 300 aaPredicted RBP3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 ZNF705BP0CI00 300 aaPredicted RBP3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 HLA-DRB4P13762 266 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 TSPOP30536 169 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 RPL29P47914 159 aaKnown RBP3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 EMP1P54849 157 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 TAS2R45P59539 299 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 PSG9Q00887 426 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 ZNF266Q14584 549 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 FAM222AQ5U5X8 452 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 Q5VSD8 79 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 LINC00305Q7Z4B0 112 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 NRARPQ7Z6K4 114 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 ZNF738Q8NE65 137 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 OR4B1Q8NGF8 309 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 OR10J6PQ8NGY7 276 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 THAP6Q8TBB0 222 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 SCGB1C1Q8TD33 95 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 C18orf15Q96N68 181 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 NIPSNAP3BQ9BS92 247 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 SHANK2-AS3Q9BTD1 123 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 TMEM208Q9BTX3 173 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 SLC25A39Q9BZJ4 359 aaPredicted RBP3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 SLC25A32Q9H2D1 315 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 AAMDCQ9H7C9 122 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 DNAJC4Q9NNZ3 241 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 DOK5Q9P104 306 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 PRELID1Q9Y255 219 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 PXMP4Q9Y6I8 212 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 HLA-DRB4X5D2U9 266 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 VPS13BQ7Z7G8 4022 aa3.13□□□□□ -1.91
RNU4-25P-201ENST00000410569 IGHV3OR16-12A0A075B7B8 117 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 IGKV1OR2-108A0A075B7D4 117 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 A0A087X0K7 114 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 IGLV5-39A0A0G2JS06 123 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 UBE2L5PA0A1B0GUS4 154 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 PMS2P5A8MQ11 134 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 H3BMM0 161 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 CST7O76096 145 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 INSP01308 110 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 HBE1P02100 147 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 SPART-AS1P0CW21 52 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 FGF7P21781 194 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 FUSP35637 526 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 PAX9P55771 341 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 XGP55808 180 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 FAM3BP58499 235 aaPredicted RBP3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 FXYD7P58549 80 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 DEFB1P60022 68 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 RHOBP62745 196 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 PDE6HQ13956 83 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 RGS21Q2M5E4 152 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 VWC2Q2TAL6 325 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 LRRC37A5PQ49AS3 106 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 FAM74A1Q5RGS3 127 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 GDF5OSQ5U4N7 250 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 LYPD1Q8N2G4 141 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 TMEM256Q8N2U0 113 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 TMEM252Q8N6L7 170 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 ATG101Q9BSB4 218 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 RSG1Q9BU20 258 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 MRPL32Q9BYC8 188 aaKnown RBP3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 WDR83OSQ9Y284 106 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 TIMM9Q9Y5J7 89 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 RFNGQ9Y644 331 aa3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 FLG2Q5D862 2391 aaPredicted RBP3.12□□□□□ -1.91
RNU4-25P-201ENST00000410569 A0A0J9YX75 114 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 FAM24AA6NFZ4 105 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 PRYO14603 147 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 ZNF253O75346 499 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 HIST1H1EP10412 219 aaKnown RBP3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 RPL12P30050 165 aaKnown RBP3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 CSN1S1P47710 185 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 RRN3P1Q2M238 152 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 FAM78BQ5VT40 261 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 CCDC28AQ8IWP9 274 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 C15orf53Q8NAA6 179 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 INO80EQ8NBZ0 244 aaPredicted RBP3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 OR5C1Q8NGR4 320 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 PPP1R1CQ8WVI7 109 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 MRPL53Q96EL3 112 aaKnown RBP3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 IGF2BP2-AS1Q96M15 143 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 MGST2Q99735 147 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 ATP5SQ99766 215 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 C20orf144Q9BQM9 153 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 NPCDR1Q9BY65 106 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 MED28Q9H204 178 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 SLC39A9Q9NUM3 307 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 LINC00588Q9Y4M8 146 aa3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 YTHDF2Q9Y5A9 579 aaKnown RBP3.11□□□□□ -1.91
RNU4-25P-201ENST00000410569 BORCS7-ASMTA0A0B4J1R7 106 aa3.1□□□□□ -1.91
RNU4-25P-201ENST00000410569 A0A1W2PPV4 95 aa3.1□□□□□ -1.91
RNU4-25P-201ENST00000410569 IGSF23A1L1A6 192 aa3.1□□□□□ -1.91
RNU4-25P-201ENST00000410569 BOLA2-SMG1P6H3BVE0 249 aa3.1□□□□□ -1.91
RNU4-25P-201ENST00000410569 SOCS3O14543 225 aa3.1□□□□□ -1.91
RNU4-25P-201ENST00000410569 OR7C2O60412 319 aa3.1□□□□□ -1.91
RNU4-25P-201ENST00000410569 MPC2O95563 127 aa3.1□□□□□ -1.91
RNU4-25P-201ENST00000410569 IGKV3-20P01619 116 aa3.1□□□□□ -1.91
RNU4-25P-201ENST00000410569 MBP02144 154 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms